SMTL ID : 3n3i.1

Crystal Structure of G48V/C95F tethered HIV-1 Protease/Saquinavir complex

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

monomer

Ligands

1 x ROC: (2S)-N-[(2S,3R)-4-[(2S,3S,4aS,8aS)-3-(tert-butylcarbamoyl)-3,4,4a,5,6,7,8,8a-octahydro-1H-isoquinolin-2-yl]-3-hydroxy-1 -phenyl-butan-2-yl]-2-(quinolin-2-ylcarbonylamino)butanediamide(Non-covalent)

ROC.1: 21 residues within 4Å: Chain A: D.25, G.27, A.28, D.29, D.30, I.47, V.48, G.49, I.50, P.81, V.82, R.112, D.129, G.131, A.132, D.134, I.151, V.152, G.153, I.154, V.186 22 PLIP interactions: 22 interactions with chain A Hydrophobic interactions: A:I.47, A:I.50, A:I.50, A:P.81, A:V.82, A:A.132, A:D.134, A:I.154, A:I.154, A:V.186 Hydrogen bonds: A:G.27, A:G.27, A:D.29, A:D.30, A:D.30, A:D.30, A:V.48 Water bridges: A:I.50, A:I.50, A:D.133 Salt bridges: A:D.25, A:D.129

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Prashar, V. et al., Insights into the mechanism of drug resistance: X-ray structure analysis of G48V/C95F tethered HIV-1 protease dimer/saquinavir complex. Biochem.Biophys.Res.Commun. (2010)

Release Date

2010-06-09

Peptides

Protease: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Protease