SMTL ID : 3n5g.1

Crystal Structure of histidine-tagged human thymidylate synthase

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.27 Å

Oligo State

homo-dimer

Ligands

6 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 4 residues within 4Å: Chain A: R.62, R.197, L.201 Chain B: R.188 4 PLIP interactions: 3 interactions with chain A, 1 interactions with chain B Water bridges: A:R.62, A:R.197 Salt bridges: A:R.197, B:R.188 SO4.2: 5 residues within 4Å: Chain A: N.195, H.208, R.227, S.228 Chain B: R.187 8 PLIP interactions: 7 interactions with chain A, 1 interactions with chain B Hydrogen bonds: A:N.195, A:S.228, A:S.228 Water bridges: A:D.198, A:R.227 Salt bridges: A:H.208, A:R.227, B:R.187 SO4.3: 3 residues within 4Å: Chain A: E.284, R.286, H.316 3 PLIP interactions: 3 interactions with chain A Water bridges: A:E.284 Salt bridges: A:R.286, A:H.316 SO4.4: 4 residues within 4Å: Chain A: R.188 Chain B: R.62, R.197, L.201 4 PLIP interactions: 1 interactions with chain A, 3 interactions with chain B Salt bridges: A:R.188, B:R.197 Water bridges: B:R.62, B:R.197 SO4.5: 5 residues within 4Å: Chain A: R.187 Chain B: N.195, H.208, R.227, S.228 8 PLIP interactions: 7 interactions with chain B, 1 interactions with chain A Hydrogen bonds: B:N.195, B:S.228, B:S.228 Water bridges: B:D.198, B:R.227 Salt bridges: B:H.208, B:R.227, A:R.187 SO4.6: 3 residues within 4Å: Chain B: E.284, R.286, H.316 4 PLIP interactions: 4 interactions with chain B Water bridges: B:E.284, B:H.316 Salt bridges: B:R.286, B:H.316

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Cardinale, D. et al., Protein-protein interface-binding peptides inhibit the cancer therapy target human thymidylate synthase. Proc.Natl.Acad.Sci.USA (2011)

Release Date

2011-06-08

Peptides

Thymidylate synthase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

Thymidylate synthase

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