SMTL ID : 3n5m.1

Crystals structure of a Bacillus anthracis aminotransferase

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.05 Å

Oligo State

homo-tetramer

Ligands

8 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 5 residues within 4Å: Chain A: S.115, G.116, S.117, V.257 Chain D: T.320 13 PLIP interactions: 4 interactions with chain D, 9 interactions with chain A Hydrogen bonds: D:T.320, D:T.320, D:T.320, A:G.116, A:S.117, A:S.117 Water bridges: D:F.321, A:N.152, A:N.152, A:N.152, A:N.152, A:K.284 Salt bridges: A:K.284 SO4.2: 3 residues within 4Å: Chain A: R.346, S.434, S.435 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:R.346, A:S.435 SO4.5: 6 residues within 4Å: Chain B: S.115, G.116, S.117, V.257 Chain C: N.319, T.320 13 PLIP interactions: 9 interactions with chain B, 4 interactions with chain C Hydrogen bonds: B:G.116, B:S.117, B:S.117, C:T.320, C:T.320, C:T.320 Water bridges: B:S.115, B:Y.149, B:N.152, B:N.152, B:K.284, C:F.321 Salt bridges: B:K.284 SO4.6: 4 residues within 4Å: Chain B: R.346, M.350, S.434, S.435 6 PLIP interactions: 6 interactions with chain B Hydrogen bonds: B:S.435 Water bridges: B:R.346, B:R.346, B:S.435, B:E.436 Salt bridges: B:R.346 SO4.9: 6 residues within 4Å: Chain B: N.319, T.320 Chain C: S.115, G.116, S.117, V.257 10 PLIP interactions: 7 interactions with chain C, 3 interactions with chain B Hydrogen bonds: C:G.116, C:S.117, C:N.152, B:T.320, B:T.320 Water bridges: C:S.115, C:S.117, C:Y.149, B:F.321 Salt bridges: C:K.284 SO4.12: 5 residues within 4Å: Chain A: T.320 Chain D: S.115, G.116, S.117, V.257 11 PLIP interactions: 4 interactions with chain A, 7 interactions with chain D Hydrogen bonds: A:T.320, A:T.320, D:G.116, D:S.117 Water bridges: A:E.118, A:F.321, D:S.117, D:Y.149, D:N.152, D:N.152 Salt bridges: D:K.284 SO4.13: 3 residues within 4Å: Chain D: R.346, S.434, S.435 4 PLIP interactions: 4 interactions with chain D Hydrogen bonds: D:S.435 Water bridges: D:E.436, D:E.436 Salt bridges: D:R.346 SO4.14: 4 residues within 4Å: Chain D: G.66, R.67, K.68, E.69 3 PLIP interactions: 3 interactions with chain D Hydrogen bonds: D:R.67, D:K.68, D:E.69

8 x CL: CHLORIDE ION(Non-functional Binders)

CL.3: 4 residues within 4Å: Chain A: R.145, H.150, M.221, E.222 Ligand excluded by PLIP CL.4: 4 residues within 4Å: Chain A: L.81, S.82 Chain D: Y.65, G.66 Ligand excluded by PLIP CL.7: 5 residues within 4Å: Chain B: R.145, H.150, M.221, E.222, I.225 Ligand excluded by PLIP CL.8: 4 residues within 4Å: Chain B: L.81, S.82 Chain C: Y.65, G.66 Ligand excluded by PLIP CL.10: 5 residues within 4Å: Chain C: R.145, H.150, M.221, E.222, I.225 Ligand excluded by PLIP CL.11: 4 residues within 4Å: Chain B: Y.65, G.66 Chain C: L.81, S.82 Ligand excluded by PLIP CL.15: 4 residues within 4Å: Chain A: Y.65, G.66 Chain D: L.81, S.82 Ligand excluded by PLIP CL.16: 5 residues within 4Å: Chain D: R.145, H.150, M.221, E.222, I.225 Ligand excluded by PLIP

Links

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Citation

Anderson, S.M. et al., Crystals structure of a Bacillus anthracis aminotransferase. TO BE PUBLISHED

Release Date

2010-06-09

Peptides

Adenosylmethionine-8-amino-7-oxononanoate aminotransferase: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

Adenosylmethionine-8-amino-7-oxononanoate aminotransferase