SMTL ID : 3n6r.1

CRYSTAL STRUCTURE OF the holoenzyme of PROPIONYL-COA CARBOXYLASE (PCC)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.20 Å

Oligo State

hetero-oligomer

Ligands

6 x BTI: 5-(HEXAHYDRO-2-OXO-1H-THIENO[3,4-D]IMIDAZOL-6-YL)PENTANAL(Covalent)

BTI.1: 8 residues within 4Å: Chain A: M.646, K.647 Chain B: C.353, G.384, F.385, P.387 Chain J: T.214, V.222 2 PLIP interactions: 1 interactions with chain J, 1 interactions with chain B Hydrophobic interactions: J:V.222 Hydrogen bonds: B:F.385 BTI.2: 8 residues within 4Å: Chain C: M.646, K.647 Chain D: C.353, G.384, F.385, P.387 Chain L: T.214, V.222 2 PLIP interactions: 1 interactions with chain L, 1 interactions with chain D Hydrophobic interactions: L:V.222 Hydrogen bonds: D:F.385 BTI.3: 8 residues within 4Å: Chain E: M.646, K.647 Chain F: C.353, G.384, F.385, P.387 Chain H: T.214, V.222 2 PLIP interactions: 1 interactions with chain F, 1 interactions with chain H Hydrogen bonds: F:F.385 Hydrophobic interactions: H:V.222 BTI.4: 9 residues within 4Å: Chain F: T.214, T.221, V.222 Chain G: M.646, K.647 Chain H: C.353, G.384, F.385, P.387 No protein-ligand interaction detected (PLIP) BTI.5: 8 residues within 4Å: Chain B: T.214, V.222 Chain I: M.646, K.647 Chain J: C.353, G.384, F.385, P.387 3 PLIP interactions: 1 interactions with chain J, 2 interactions with chain B Hydrogen bonds: J:F.385, B:T.214 Hydrophobic interactions: B:V.222 BTI.6: 7 residues within 4Å: Chain D: T.214, V.222 Chain K: M.646, K.647 Chain L: C.353, G.384, F.385 1 PLIP interactions: 1 interactions with chain D Hydrophobic interactions: D:V.222

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Huang, C.S. et al., Crystal structure of the alpha(6)beta(6) holoenzyme of propionyl-coenzyme A carboxylase. Nature (2010)

Release Date

2010-08-25

Peptides

Propionyl-CoA carboxylase, alpha subunit: ACEGIK
Propionyl-CoA carboxylase, beta subunit: BDFHJL

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

C
C

E
E

G
G

I
I

K
K

B
B

D
D

F
F

H
H

J
J

L
L

Propionyl-CoA carboxylase, alpha subunit

Propionyl-CoA carboxylase, beta subunit