SMTL ID : 3n7t.2 (1 other biounit)

Crystal structure of a macrophage binding protein from Coccidioides immitis

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

homo-dimer

Ligands

2 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.1: 5 residues within 4Å: Chain A: H.39, P.227, Q.228, A.230, T.231 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:H.39, A:P.227, A:A.230, A:T.231, A:T.231 Water bridges: A:N.232 EDO.6: 5 residues within 4Å: Chain B: H.39, P.227, Q.228, A.230, T.231 5 PLIP interactions: 5 interactions with chain B Hydrogen bonds: B:P.227, B:A.230, B:T.231, B:T.231 Water bridges: B:N.232

6 x CL: CHLORIDE ION(Non-functional Binders)

CL.2: 4 residues within 4Å: Chain A: T.172, T.173, K.174 Chain B: R.186 Ligand excluded by PLIP CL.3: 2 residues within 4Å: Chain A: F.23, W.24 Ligand excluded by PLIP CL.4: 2 residues within 4Å: Chain A: K.11, D.52 Ligand excluded by PLIP CL.7: 4 residues within 4Å: Chain A: R.186 Chain B: T.172, T.173, K.174 Ligand excluded by PLIP CL.8: 2 residues within 4Å: Chain B: F.23, W.24 Ligand excluded by PLIP CL.9: 2 residues within 4Å: Chain B: K.11, D.52 Ligand excluded by PLIP

2 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.5: 1 residues within 4Å: Chain A: R.220 3 PLIP interactions: 3 interactions with chain A Water bridges: A:R.220, A:R.220 Salt bridges: A:R.220 PO4.10: 1 residues within 4Å: Chain B: R.220 4 PLIP interactions: 4 interactions with chain B Water bridges: B:Y.135, B:R.220, B:R.220 Salt bridges: B:R.220

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Edwards, T.E. et al., Crystal structure of a macrophage binding protein from Coccidioides immitis. TO BE PUBLISHED

Release Date

2010-06-16

Peptides

Macrophage binding protein: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

Macrophage binding protein

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