SMTL ID : 3ng2.1

Crystal structure of the RNF4 ring domain dimer

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

homo-dimer

Ligands

4 x ZN: ZINC ION(Non-covalent)

ZN.1: 5 residues within 4Å: Chain A: C.13, C.16, R.28, C.40, C.43 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.13, A:C.16, A:C.40, A:C.43 ZN.2: 5 residues within 4Å: Chain A: T.33, C.35, H.37, C.54, C.57 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.35, A:H.37, A:C.54, A:C.57 ZN.4: 4 residues within 4Å: Chain B: C.13, C.16, C.40, C.43 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:C.13, B:C.16, B:C.40, B:C.43 ZN.5: 5 residues within 4Å: Chain B: T.33, C.35, H.37, C.54, C.57 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:C.35, B:H.37, B:C.54, B:C.57

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.3: 3 residues within 4Å: Chain A: Q.42, R.45, K.49 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:Q.42 Salt bridges: A:R.45, A:K.49

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Liew, C.W. et al., RING domain dimerization is essential for RNF4 function. Biochem.J. (2010)

Release Date

2010-10-06

Peptides

RING finger protein 4: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

RING finger protein 4