SMTL ID : 3ngn.1

Crystal structure of the human CNOT6L nuclease domain in complex with AMP

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.40 Å

Oligo State

monomer

Ligands

2 x AMP: ADENOSINE MONOPHOSPHATE(Non-covalent)

AMP.1: 12 residues within 4Å: Chain A: N.38, E.83, H.203, W.206, P.208, K.214, D.253, N.255, N.322, F.327, I.331, H.372 15 PLIP interactions: 15 interactions with chain A Hydrogen bonds: A:N.38, A:E.83, A:E.83, A:E.83, A:K.214, A:N.255, A:N.255, A:L.257, A:N.322, A:N.322 Water bridges: A:T.324 Salt bridges: A:H.203, A:H.372 pi-Stacking: A:F.327, A:F.327 AMP.2: 4 residues within 4Å: Chain A: I.114, M.115, S.116, E.119 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:I.114, A:S.116, A:E.119

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wang, H. et al., Crystal structure of the human CNOT6L nuclease domain reveals strict poly(A) substrate specificity. Embo J. (2010)

Release Date

2010-07-28

Peptides

CCR4-NOT transcription complex subunit 6-like: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

CCR4-NOT transcription complex subunit 6-like

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