SMTL ID : 3ngq.1

Crystal structure of the human CNOT6L nuclease domain

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

monomer

Ligands

1 x 1PS: 3-PYRIDINIUM-1-YLPROPANE-1-SULFONATE(Non-covalent)

1PS.1: 8 residues within 4Å: Chain A: W.206, P.208, K.214, N.255, L.257, N.322, F.327 Ligands: MG.3 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:F.327 Hydrogen bonds: A:N.255 Water bridges: A:L.257 Salt bridges: A:K.214

2 x MG: MAGNESIUM ION(Non-covalent)

MG.2: 3 residues within 4Å: Chain A: N.38, E.83 Ligands: MG.3 4 PLIP interactions: 1 interactions with chain A, 3 Ligand-Water interactions Metal complexes: A:E.83, H2O.1, H2O.1, H2O.1 MG.3: 8 residues within 4Å: Chain A: N.38, H.203, D.253, N.255, I.331, H.372 Ligands: 1PS.1, MG.2 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:D.253

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wang, H. et al., Crystal structure of the human CNOT6L nuclease domain reveals strict poly(A) substrate specificity. Embo J. (2010)

Release Date

2010-07-28

Peptides

CCR4-NOT transcription complex subunit 6-like: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

CCR4-NOT transcription complex subunit 6-like