SMTL ID : 3niz.2 (1 other biounit)

Cryptosporidium parvum cyclin-dependent kinase cgd5_2510 with ADP bound.

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.40 Å

Oligo State

homo-dimer

Ligands

4 x MG: MAGNESIUM ION(Non-covalent)

MG.1: 4 residues within 4Å: Chain A: Q.148, N.149, D.162 Ligands: ADP.3 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:D.162 MG.2: 2 residues within 4Å: Chain A: D.162 Ligands: ADP.3 No protein-ligand interaction detected (PLIP) MG.4: 4 residues within 4Å: Chain B: Q.148, N.149, D.162 Ligands: ADP.6 1 PLIP interactions: 1 interactions with chain B Metal complexes: B:D.162 MG.5: 2 residues within 4Å: Chain B: D.162 Ligands: ADP.6 No protein-ligand interaction detected (PLIP)

2 x ADP: ADENOSINE-5'-DIPHOSPHATE(Non-covalent)

ADP.3: 19 residues within 4Å: Chain A: G.30, E.31, G.32, T.33, V.37, A.49, K.51, V.82, F.98, E.99, F.100, M.101, D.104, Q.148, N.149, L.151, D.162 Ligands: MG.1, MG.2 13 PLIP interactions: 13 interactions with chain A Hydrogen bonds: A:E.31, A:T.33, A:E.99, A:M.101, A:D.104, A:D.104 Water bridges: A:Y.34, A:Y.34, A:K.51, A:K.51, A:D.162 Salt bridges: A:K.51, A:K.51 ADP.6: 19 residues within 4Å: Chain B: G.30, E.31, G.32, T.33, V.37, A.49, K.51, V.82, F.98, E.99, F.100, M.101, D.104, Q.148, N.149, L.151, D.162 Ligands: MG.4, MG.5 12 PLIP interactions: 12 interactions with chain B Hydrogen bonds: B:E.31, B:T.33, B:E.99, B:M.101, B:D.104 Water bridges: B:Y.34, B:Y.34, B:K.51, B:K.51, B:E.69 Salt bridges: B:K.51, B:K.51

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wernimont, A.K. et al., Cryptosporidium parvum cyclin-dependent kinase cgd5_2510 with ADP bound. To be Published

Release Date

2010-07-28

Peptides

Rhodanese family protein: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

Rhodanese family protein

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