SMTL ID : 3nka.1 (1 other biounit)

Crystal structure of AqpZ H174G,T183F

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

homo-tetramer

Ligands

12 x BOG: octyl beta-D-glucopyranoside(Non-covalent)

BOG.1: 3 residues within 4Å: Chain A: W.209, V.213 Ligands: BOG.2 No protein-ligand interaction detected (PLIP) BOG.2: 8 residues within 4Å: Chain A: L.205, E.206, Q.207, L.208, W.209, W.212 Ligands: BOG.1, BOG.3 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:W.212, A:W.212 Hydrogen bonds: A:E.206, A:W.209 BOG.3: 3 residues within 4Å: Chain A: G.201, E.206 Ligands: BOG.2 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:E.206 BOG.6: 3 residues within 4Å: Chain B: W.209, V.213 Ligands: BOG.7 No protein-ligand interaction detected (PLIP) BOG.7: 8 residues within 4Å: Chain B: L.205, E.206, Q.207, L.208, W.209, W.212 Ligands: BOG.6, BOG.8 4 PLIP interactions: 4 interactions with chain B Hydrophobic interactions: B:W.212, B:W.212 Hydrogen bonds: B:E.206, B:W.209 BOG.8: 3 residues within 4Å: Chain B: G.201, E.206 Ligands: BOG.7 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:E.206 BOG.11: 3 residues within 4Å: Chain C: W.209, V.213 Ligands: BOG.12 No protein-ligand interaction detected (PLIP) BOG.12: 8 residues within 4Å: Chain C: L.205, E.206, Q.207, L.208, W.209, W.212 Ligands: BOG.11, BOG.13 4 PLIP interactions: 4 interactions with chain C Hydrophobic interactions: C:W.212, C:W.212 Hydrogen bonds: C:E.206, C:W.209 BOG.13: 3 residues within 4Å: Chain C: G.201, E.206 Ligands: BOG.12 1 PLIP interactions: 1 interactions with chain C Hydrogen bonds: C:E.206 BOG.16: 3 residues within 4Å: Chain D: W.209, V.213 Ligands: BOG.17 No protein-ligand interaction detected (PLIP) BOG.17: 8 residues within 4Å: Chain D: L.205, E.206, Q.207, L.208, W.209, W.212 Ligands: BOG.16, BOG.18 4 PLIP interactions: 4 interactions with chain D Hydrophobic interactions: D:W.212, D:W.212 Hydrogen bonds: D:E.206, D:W.209 BOG.18: 3 residues within 4Å: Chain D: G.201, E.206 Ligands: BOG.17 1 PLIP interactions: 1 interactions with chain D Hydrogen bonds: D:E.206

8 x GOL: GLYCEROL(Non-functional Binders)

GOL.4: 1 residues within 4Å: Chain A: G.31 No protein-ligand interaction detected (PLIP) GOL.5: 6 residues within 4Å: Chain A: A.26, A.30, F.39, V.42, I.181, N.185 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:N.185, A:N.185 GOL.9: 1 residues within 4Å: Chain B: G.31 No protein-ligand interaction detected (PLIP) GOL.10: 6 residues within 4Å: Chain B: A.26, A.30, F.39, V.42, I.181, N.185 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:N.185, B:N.185 GOL.14: 1 residues within 4Å: Chain C: G.31 No protein-ligand interaction detected (PLIP) GOL.15: 6 residues within 4Å: Chain C: A.26, A.30, F.39, V.42, I.181, N.185 2 PLIP interactions: 2 interactions with chain C Hydrogen bonds: C:N.185, C:N.185 GOL.19: 1 residues within 4Å: Chain D: G.31 No protein-ligand interaction detected (PLIP) GOL.20: 6 residues within 4Å: Chain D: A.26, A.30, F.39, V.42, I.181, N.185 2 PLIP interactions: 2 interactions with chain D Hydrogen bonds: D:N.185, D:N.185

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Savage, D.F. et al., Structural context shapes the aquaporin selectivity filter. Proc.Natl.Acad.Sci.USA (2010)

Release Date

2010-11-03

Peptides

Aquaporin Z: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

C
A

D
A

Membrane

We predict this structure to be a membrane protein.
Show / Hide

Aquaporin Z

Related Entries With Identical Sequence