SMTL ID : 3nkc.1 (1 other biounit)

Crystal structure of AqpZ F43W,H174G,T183F

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 3.10 Å

Oligo State

homo-tetramer

Ligands

12 x BOG: octyl beta-D-glucopyranoside(Non-covalent)

BOG.1: 4 residues within 4Å: Chain A: W.209, W.212, V.213 Ligands: BOG.2 1 PLIP interactions: 1 interactions with chain A Hydrophobic interactions: A:W.212 BOG.2: 8 residues within 4Å: Chain A: L.205, E.206, Q.207, L.208, W.209, W.212 Ligands: BOG.1, BOG.3 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:W.212, A:W.212 Hydrogen bonds: A:W.209, A:W.209 BOG.3: 3 residues within 4Å: Chain A: G.201, L.205 Ligands: BOG.2 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:L.205 Hydrogen bonds: A:E.206 BOG.4: 4 residues within 4Å: Chain B: W.209, W.212, V.213 Ligands: BOG.5 1 PLIP interactions: 1 interactions with chain B Hydrophobic interactions: B:W.212 BOG.5: 8 residues within 4Å: Chain B: L.205, E.206, Q.207, L.208, W.209, W.212 Ligands: BOG.4, BOG.6 4 PLIP interactions: 4 interactions with chain B Hydrophobic interactions: B:W.212, B:W.212 Hydrogen bonds: B:W.209, B:W.209 BOG.6: 3 residues within 4Å: Chain B: G.201, L.205 Ligands: BOG.5 2 PLIP interactions: 2 interactions with chain B Hydrophobic interactions: B:L.205 Hydrogen bonds: B:E.206 BOG.7: 4 residues within 4Å: Chain C: W.209, W.212, V.213 Ligands: BOG.8 1 PLIP interactions: 1 interactions with chain C Hydrophobic interactions: C:W.212 BOG.8: 8 residues within 4Å: Chain C: L.205, E.206, Q.207, L.208, W.209, W.212 Ligands: BOG.7, BOG.9 4 PLIP interactions: 4 interactions with chain C Hydrophobic interactions: C:W.212, C:W.212 Hydrogen bonds: C:W.209, C:W.209 BOG.9: 3 residues within 4Å: Chain C: G.201, L.205 Ligands: BOG.8 2 PLIP interactions: 2 interactions with chain C Hydrophobic interactions: C:L.205 Hydrogen bonds: C:E.206 BOG.10: 4 residues within 4Å: Chain D: W.209, W.212, V.213 Ligands: BOG.11 1 PLIP interactions: 1 interactions with chain D Hydrophobic interactions: D:W.212 BOG.11: 8 residues within 4Å: Chain D: L.205, E.206, Q.207, L.208, W.209, W.212 Ligands: BOG.10, BOG.12 4 PLIP interactions: 4 interactions with chain D Hydrophobic interactions: D:W.212, D:W.212 Hydrogen bonds: D:W.209, D:W.209 BOG.12: 3 residues within 4Å: Chain D: G.201, L.205 Ligands: BOG.11 2 PLIP interactions: 2 interactions with chain D Hydrophobic interactions: D:L.205 Hydrogen bonds: D:E.206

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Savage, D.F. et al., Structural context shapes the aquaporin selectivity filter. Proc.Natl.Acad.Sci.USA (2010)

Release Date

2010-11-03

Peptides

Aquaporin Z: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

C
A

D
A

Membrane

We predict this structure to be a membrane protein.
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Aquaporin Z

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