- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.40 Å
- Oligo State
- homo-trimer
- Ligands
- 4 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
- 2 x SO3: SULFITE ION(Non-covalent)
SO3.3: 1 residues within 4Å:- Chain A: K.63
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:K.63, A:K.63, A:K.63
SO3.9: 5 residues within 4Å:- Chain C: T.136, D.162, I.163, S.166, S.167
4 PLIP interactions:4 interactions with chain C- Hydrogen bonds: C:D.162, C:S.166, C:S.167
- Water bridges: C:S.167
- 5 x SO4: SULFATE ION(Non-functional Binders)
SO4.4: 7 residues within 4Å:- Chain A: R.154, R.157, R.161
- Chain C: R.21, V.43, E.44, R.47
7 PLIP interactions:4 interactions with chain A, 3 interactions with chain C- Water bridges: A:R.154, C:R.21
- Salt bridges: A:R.154, A:R.157, A:R.161, C:R.21, C:R.47
SO4.5: 2 residues within 4Å:- Chain A: R.40, R.41
3 PLIP interactions:3 interactions with chain A- Water bridges: A:R.40
- Salt bridges: A:R.40, A:R.41
SO4.6: 4 residues within 4Å:- Chain A: E.151, P.152, D.153, R.154
7 PLIP interactions:7 interactions with chain A- Hydrogen bonds: A:E.151, A:D.153, A:D.153, A:R.154
- Water bridges: A:R.157, A:R.157, A:R.157
SO4.10: 7 residues within 4Å:- Chain B: R.21, V.43, E.44, R.47
- Chain C: R.154, R.157, R.161
8 PLIP interactions:4 interactions with chain C, 4 interactions with chain B- Water bridges: C:R.154, B:R.21, B:E.44
- Salt bridges: C:R.154, C:R.157, C:R.161, B:R.21, B:R.47
SO4.11: 5 residues within 4Å:- Chain C: Y.58, R.72, T.93, Y.97, K.133
9 PLIP interactions:9 interactions with chain C- Hydrogen bonds: C:Y.58, C:Y.97
- Water bridges: C:Y.58, C:S.90, C:T.93, C:K.133, C:K.133
- Salt bridges: C:R.72, C:K.133
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Babu, M. et al., A dual function of the CRISPR-Cas system in bacterial antivirus immunity and DNA repair. Mol.Microbiol. (2011)
- Release Date
- 2010-08-25
- Peptides
- protein ygbT: ABC
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
C
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.40 Å
- Oligo State
- homo-trimer
- Ligands
- 4 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
- 2 x SO3: SULFITE ION(Non-covalent)
- 5 x SO4: SULFATE ION(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Babu, M. et al., A dual function of the CRISPR-Cas system in bacterial antivirus immunity and DNA repair. Mol.Microbiol. (2011)
- Release Date
- 2010-08-25
- Peptides
- protein ygbT: ABC
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
C