- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 3.10 Å
- Oligo State
- homo-hexamer
- Ligands
- 6 x MG: MAGNESIUM ION(Non-covalent)
- 6 x TPS: THIAMIN PHOSPHATE(Non-covalent)
TPS.2: 17 residues within 4Å:- Chain A: Y.13, Q.43, R.45, N.75, H.90, S.114, Y.134, T.143, T.145, K.146, I.179, G.180, G.181, C.207, V.209, S.210
- Ligands: POP.3
12 PLIP interactions:12 interactions with chain A- Hydrophobic interactions: A:Y.13, A:I.179, A:V.209
- Hydrogen bonds: A:Q.43, A:Q.43, A:T.143, A:T.143, A:T.145, A:G.181, A:V.209, A:S.210
- pi-Stacking: A:H.90
TPS.5: 18 residues within 4Å:- Chain B: Y.13, V.15, Q.43, R.45, N.75, H.90, S.114, T.143, T.145, K.146, I.179, G.180, G.181, C.207, V.208, V.209, S.210
- Ligands: POP.6
11 PLIP interactions:11 interactions with chain B- Hydrophobic interactions: B:Y.13, B:I.179
- Hydrogen bonds: B:Q.43, B:Q.43, B:T.143, B:T.145, B:T.145, B:G.181, B:V.209, B:S.210
- pi-Stacking: B:H.90
TPS.8: 15 residues within 4Å:- Chain C: Y.13, Q.43, R.45, N.75, H.90, S.114, Y.134, T.143, T.145, I.179, G.180, G.181, V.209, S.210
- Ligands: POP.9
9 PLIP interactions:9 interactions with chain C- Hydrophobic interactions: C:Y.13
- Hydrogen bonds: C:Q.43, C:Q.43, C:T.145, C:T.145, C:G.181, C:V.209, C:S.210
- pi-Stacking: C:H.90
TPS.11: 18 residues within 4Å:- Chain D: Y.13, Q.43, R.45, N.75, H.90, S.114, Y.134, G.136, T.139, T.143, T.145, I.179, G.180, G.181, V.208, V.209, S.210
- Ligands: POP.12
10 PLIP interactions:10 interactions with chain D- Hydrophobic interactions: D:Y.13, D:T.145, D:I.179
- Hydrogen bonds: D:Q.43, D:Q.43, D:T.145, D:G.181, D:V.209, D:S.210
- pi-Stacking: D:H.90
TPS.14: 15 residues within 4Å:- Chain E: Y.13, Q.43, R.45, N.75, H.90, S.114, Y.134, T.143, T.145, I.179, G.180, G.181, V.209, S.210
- Ligands: POP.15
11 PLIP interactions:11 interactions with chain E- Hydrophobic interactions: E:Y.13, E:I.179
- Hydrogen bonds: E:Q.43, E:Q.43, E:T.143, E:T.145, E:T.145, E:G.181, E:V.209, E:S.210
- pi-Stacking: E:H.90
TPS.17: 17 residues within 4Å:- Chain F: Y.13, Q.43, R.45, N.75, H.90, S.114, Y.134, G.136, T.143, T.145, I.179, G.180, G.181, V.208, V.209, S.210
- Ligands: POP.18
10 PLIP interactions:10 interactions with chain F- Hydrophobic interactions: F:Y.13, F:Y.134
- Hydrogen bonds: F:Q.43, F:Q.43, F:T.143, F:T.145, F:T.145, F:G.181, F:V.209
- pi-Stacking: F:H.90
- 6 x POP: PYROPHOSPHATE 2-(Non-covalent)
POP.3: 11 residues within 4Å:- Chain A: R.45, K.47, N.75, D.76, V.91, G.92, D.95, S.114, K.146
- Ligands: MG.1, TPS.2
9 PLIP interactions:9 interactions with chain A- Hydrogen bonds: A:N.75, A:V.91, A:D.95, A:S.114
- Salt bridges: A:R.45, A:K.47, A:K.47, A:K.146, A:K.146
POP.6: 11 residues within 4Å:- Chain B: R.45, K.47, N.75, D.76, V.91, G.92, D.95, S.114, K.146
- Ligands: MG.4, TPS.5
6 PLIP interactions:6 interactions with chain B- Hydrogen bonds: B:N.75, B:S.114
- Salt bridges: B:R.45, B:K.47, B:K.146, B:K.146
POP.9: 10 residues within 4Å:- Chain C: R.45, K.47, N.75, D.76, V.91, G.92, D.95, S.114
- Ligands: MG.7, TPS.8
5 PLIP interactions:5 interactions with chain C- Hydrogen bonds: C:N.75, C:D.95, C:S.114
- Salt bridges: C:R.45, C:K.47
POP.12: 10 residues within 4Å:- Chain D: R.45, K.47, N.75, D.76, G.92, D.95, S.114, K.146
- Ligands: MG.10, TPS.11
7 PLIP interactions:7 interactions with chain D- Hydrogen bonds: D:N.75, D:S.114
- Salt bridges: D:R.45, D:K.47, D:K.47, D:K.146, D:K.146
POP.15: 9 residues within 4Å:- Chain E: R.45, K.47, N.75, D.76, G.92, S.114, K.146
- Ligands: MG.13, TPS.14
8 PLIP interactions:8 interactions with chain E- Hydrogen bonds: E:N.75, E:D.76, E:S.114
- Salt bridges: E:R.45, E:K.47, E:K.47, E:K.146, E:K.146
POP.18: 8 residues within 4Å:- Chain F: R.45, N.75, D.76, G.92, D.95, S.114
- Ligands: MG.16, TPS.17
4 PLIP interactions:4 interactions with chain F- Hydrogen bonds: F:N.75, F:S.114, F:S.114
- Salt bridges: F:R.45
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Paul, D. et al., Domain Organization in Candida glabrata THI6, a Bifunctional Enzyme Required for Thiamin Biosynthesis in Eukaryotes . Biochemistry (2010)
- Release Date
- 2010-11-10
- Peptides
- Thiamine biosynthetic bifunctional enzyme: ABCDEF
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
DE
EF
F
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 3.10 Å
- Oligo State
- homo-hexamer
- Ligands
- 6 x MG: MAGNESIUM ION(Non-covalent)
- 6 x TPS: THIAMIN PHOSPHATE(Non-covalent)
- 6 x POP: PYROPHOSPHATE 2-(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Paul, D. et al., Domain Organization in Candida glabrata THI6, a Bifunctional Enzyme Required for Thiamin Biosynthesis in Eukaryotes . Biochemistry (2010)
- Release Date
- 2010-11-10
- Peptides
- Thiamine biosynthetic bifunctional enzyme: ABCDEF
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
DE
EF
F