SMTL ID : 3npd.1

Crystal structure of a putative secreted protein (PA3611) from PSEUDOMONAS AERUGINOSA at 1.60 A resolution

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.60 Å

Oligo State

monomer

Ligands

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 4 residues within 4Å: Chain A: R.51, A.52, Y.96, K.97 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:A.52 Water bridges: A:Y.96 Salt bridges: A:R.51, A:K.97 SO4.2: 3 residues within 4Å: Chain A: G.1, A.2, F.7 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:A.2

4 x CXS: 3-CYCLOHEXYL-1-PROPYLSULFONIC ACID(Non-covalent)

CXS.3: 5 residues within 4Å: Chain A: R.66, R.106, D.108, S.111 Ligands: EDO.7 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:D.108 Water bridges: A:R.66, A:R.66 Salt bridges: A:R.66 CXS.4: 5 residues within 4Å: Chain A: M.12, G.78, Q.81, L.82, R.85 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:L.82 Hydrogen bonds: A:G.78 Water bridges: A:Y.79 CXS.5: 7 residues within 4Å: Chain A: I.28, Y.37, L.69, N.76, Y.79, Y.91 Ligands: CXS.6 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:I.28, A:I.28, A:L.69, A:Y.91 Hydrogen bonds: A:N.76 Water bridges: A:Y.37 CXS.6: 8 residues within 4Å: Chain A: I.32, H.54, M.58, V.65, Q.68, L.69, F.93 Ligands: CXS.5 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:I.32, A:Q.68, A:L.69, A:F.93

2 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.7: 3 residues within 4Å: Chain A: R.66, S.111 Ligands: CXS.3 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:R.66 Water bridges: A:S.111 EDO.8: 3 residues within 4Å: Chain A: L.4, K.5, E.8 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:E.8

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Das, D. et al., Crystal structure of a putative quorum sensing-regulated protein (PA3611) from the Pseudomonas-specific DUF4146 family. Proteins (2014)

Release Date

2010-07-28

Peptides

putative secreted protein: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

putative secreted protein