SMTL ID : 3npi.1

Crystal structure of a TetR family regulatory protein (DIP1788) from CORYNEBACTERIUM DIPHTHERIAE at 2.96 A resolution

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.96 Å

Oligo State

homo-dimer

Ligands

8 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 8 residues within 4Å: Chain A: E.119, H.123, K.126, V.127, A.128, E.129 Chain B: R.180, S.181 7 PLIP interactions: 5 interactions with chain A, 2 interactions with chain B Hydrogen bonds: A:E.119, A:V.127, A:A.128, A:E.129, B:R.180, B:S.181 Salt bridges: A:H.123 SO4.2: 4 residues within 4Å: Chain A: A.39, K.40, L.41, K.62 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:A.39, A:L.41 Salt bridges: A:K.62 SO4.3: 3 residues within 4Å: Chain A: R.75, R.105, H.109 3 PLIP interactions: 3 interactions with chain A Salt bridges: A:R.75, A:R.105, A:H.109 SO4.4: 2 residues within 4Å: Chain A: R.201, R.202 1 PLIP interactions: 1 interactions with chain A Salt bridges: A:R.201 SO4.5: 3 residues within 4Å: Chain B: R.75, R.105, H.109 3 PLIP interactions: 3 interactions with chain B Salt bridges: B:R.75, B:R.105, B:H.109 SO4.6: 4 residues within 4Å: Chain B: A.39, K.40, L.41, K.62 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:L.41 Salt bridges: B:K.62 SO4.7: 7 residues within 4Å: Chain A: R.180, S.181 Chain B: H.123, K.126, V.127, A.128, E.129 8 PLIP interactions: 6 interactions with chain B, 2 interactions with chain A Hydrogen bonds: B:E.119, B:E.119, B:V.127, B:A.128, B:E.129, A:R.180, A:S.181 Salt bridges: B:H.123 SO4.8: 3 residues within 4Å: Chain B: R.96, R.201, R.202 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:R.96 Salt bridges: B:R.201

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Joint Center for Structural Genomics (JCSG), Crystal structure of a TetR family regulatory protein (DIP1788) from CORYNEBACTERIUM DIPHTHERIAE at 2.96 A resolution. To be published

Release Date

2010-08-18

Peptides

TetR family regulatory protein: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

TetR family regulatory protein