SMTL ID : 3nr3.1

Crystal Structure of Human Peripheral Myelin Protein 2

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.95 Å

Oligo State

monomer

Ligands

1 x PLM: PALMITIC ACID(Non-covalent)

PLM.1: 14 residues within 4Å: Chain A: M.42, L.45, G.55, P.60, T.75, S.77, K.80, A.97, D.98, I.126, R.128, C.139, R.148, Y.150 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:L.45, A:P.60, A:T.75, A:A.97, A:D.98, A:I.126 Water bridges: A:R.128, A:R.148, A:Y.150 Salt bridges: A:R.128, A:R.148

3 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 2 residues within 4Å: Chain A: W.119, D.120 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:D.120 SO4.3: 4 residues within 4Å: Chain A: A.58, K.59, S.77, T.78 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:K.59, A:K.59, A:T.78 Water bridges: A:F.79 Salt bridges: A:K.31 SO4.4: 3 residues within 4Å: Chain A: N.37, D.40, V.144 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:N.37, A:N.37, A:D.40 Water bridges: A:V.145

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.5: 5 residues within 4Å: Chain A: S.35, E.36, N.37, F.38, D.39 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:N.37, A:F.38, A:D.39

1 x CIT: CITRIC ACID(Non-functional Binders)

CIT.6: 4 residues within 4Å: Chain A: R.74, N.81, T.82, E.83 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:R.74, A:N.81 Water bridges: A:N.81, A:E.83 Salt bridges: A:R.74

1 x EPE: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID(Non-functional Binders)

EPE.7: 4 residues within 4Å: Chain A: G.48, L.49, A.50, R.52 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:L.49, A:A.50 Water bridges: A:G.48, A:T.51, A:R.52, A:R.52 Salt bridges: A:R.52

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.8: 1 residues within 4Å: Chain A: G.68 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ugochukwu, E. et al., Crystal Structure of Human Peripheral Myelin Protein 2. To be Published

Release Date

2010-08-04

Peptides

PMP2 protein: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

PMP2 protein