- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.00 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x CL: CHLORIDE ION(Non-functional Binders)
- 2 x FAD: FLAVIN-ADENINE DINUCLEOTIDE(Non-covalent)
- 2 x COA: COENZYME A(Non-covalent)
COA.3: 30 residues within 4Å:- Chain A: V.10, A.11, A.14, S.15, A.18, R.19, R.22, S.39, F.40, N.42, S.43, L.61, F.71, A.321, N.325, R.329
- Chain B: V.380, Y.388, Y.446, K.454, Q.459, F.462, V.463, N.466, V.533, G.534, L.535, N.538, N.553
- Ligands: FAD.2
20 PLIP interactions:9 interactions with chain B, 11 interactions with chain A- Hydrogen bonds: B:Q.459, B:N.466, B:N.466, B:V.533, B:N.538, A:F.40, A:N.325, A:N.325
- Water bridges: B:H.381, B:K.454, A:S.15, A:R.19, A:R.19
- Salt bridges: B:K.454, B:K.454, A:R.19, A:R.22, A:R.22, A:R.329
- Hydrophobic interactions: A:V.10
COA.6: 31 residues within 4Å:- Chain A: Y.379, Y.388, Y.446, K.454, Q.459, F.462, V.463, N.466, V.533, G.534, L.535, N.538
- Chain B: V.10, A.11, A.14, S.15, A.18, R.19, R.22, S.39, F.40, A.41, N.42, S.43, L.61, Q.62, F.71, A.321, N.325, R.329
- Ligands: FAD.5
18 PLIP interactions:12 interactions with chain B, 6 interactions with chain A- Hydrophobic interactions: B:V.10, B:Q.62
- Hydrogen bonds: B:F.40, B:N.325, A:Q.459, A:N.466, A:N.466, A:V.533, A:N.538
- Water bridges: B:R.19, B:R.19, B:R.22, B:R.22, A:H.381
- Salt bridges: B:R.19, B:R.22, B:R.22, B:R.329
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Warner, M.D. et al., Characterization of an NADH-Dependent Persulfide Reductase from Shewanella loihica PV-4: Implications for the Mechanism of Sulfur Respiration via FAD-Dependent Enzymes . Biochemistry (2010)
- Release Date
- 2010-12-08
- Peptides
- FAD-dependent pyridine nucleotide-disulphide oxidoreductase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.00 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x CL: CHLORIDE ION(Non-functional Binders)
- 2 x FAD: FLAVIN-ADENINE DINUCLEOTIDE(Non-covalent)
- 2 x COA: COENZYME A(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Warner, M.D. et al., Characterization of an NADH-Dependent Persulfide Reductase from Shewanella loihica PV-4: Implications for the Mechanism of Sulfur Respiration via FAD-Dependent Enzymes . Biochemistry (2010)
- Release Date
- 2010-12-08
- Peptides
- FAD-dependent pyridine nucleotide-disulphide oxidoreductase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B