- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.95 Å
- Oligo State
- homo-dimer
- Ligands
- 17 x IOD: IODIDE ION(Non-functional Binders)
- 2 x I3M: Tri-iodode Anion(Non-covalent)
- 23 x FE: FE (III) ION(Non-covalent)(Non-functional Binders)
FE.14: 1 residues within 4Å:- Chain A: I.2
No protein-ligand interaction detected (PLIP)FE.15: 2 residues within 4Å:- Chain A: Q.112, I.115
No protein-ligand interaction detected (PLIP)FE.16: 5 residues within 4Å:- Chain A: M.118, P.125, V.126, G.127, E.128
No protein-ligand interaction detected (PLIP)FE.17: 1 residues within 4Å:- Chain A: E.35
No protein-ligand interaction detected (PLIP)FE.18: 1 residues within 4Å:- Ligands: IOD.6
No protein-ligand interaction detected (PLIP)FE.19: 2 residues within 4Å:- Chain A: N.53, N.57
No protein-ligand interaction detected (PLIP)FE.20: 3 residues within 4Å:- Chain A: P.125
- Chain B: I.129
- Ligands: IOD.7
No protein-ligand interaction detected (PLIP)FE.21: 2 residues within 4Å:- Chain A: V.142, R.143
No protein-ligand interaction detected (PLIP)FE.22: 4 residues within 4Å:- Chain B: E.76, W.80, W.133
- Ligands: IOD.2
No protein-ligand interaction detected (PLIP)FE.23: 3 residues within 4Å:- Chain A: I.15, S.16, T.19
No protein-ligand interaction detected (PLIP)FE.24: 4 residues within 4Å:- Chain A: E.98
- Chain B: R.132, L.136
- Ligands: IOD.11
No protein-ligand interaction detected (PLIP)FE.25: 2 residues within 4Å:- Chain A: H.87, R.97
No protein-ligand interaction detected (PLIP)FE.26: 4 residues within 4Å:- Chain A: W.80
- Chain B: R.132
- Ligands: IOD.11, IOD.12
No protein-ligand interaction detected (PLIP)FE.33: 2 residues within 4Å:- Chain B: E.71, N.74
No protein-ligand interaction detected (PLIP)FE.34: 5 residues within 4Å:- Chain B: M.118, P.125, V.126, G.127, E.128
No protein-ligand interaction detected (PLIP)FE.35: 1 residues within 4Å:- Chain B: R.162
No protein-ligand interaction detected (PLIP)FE.36: 0 residues within 4Å:- (No contacts)
No protein-ligand interaction detected (PLIP)FE.37: 1 residues within 4Å:- Chain B: M.118
No protein-ligand interaction detected (PLIP)FE.38: 3 residues within 4Å:- Chain B: Y.169, K.170, R.173
No protein-ligand interaction detected (PLIP)FE.39: 2 residues within 4Å:- Chain A: N.120
- Chain B: R.132
No protein-ligand interaction detected (PLIP)FE.40: 5 residues within 4Å:- Chain B: S.44, E.45, G.46, E.128, K.131
1 PLIP interactions:1 interactions with chain B- Metal complexes: B:E.128
FE.41: 3 residues within 4Å:- Chain B: P.160, G.220, V.221
No protein-ligand interaction detected (PLIP)FE.42: 1 residues within 4Å:- Chain B: I.124
No protein-ligand interaction detected (PLIP)- 1 x NA: SODIUM ION(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Du, S. et al., Structure of the HIV-1 full-length capsid protein in a conformationally trapped unassembled state induced by small-molecule binding. J.Mol.Biol. (2011)
- Release Date
- 2010-12-01
- Peptides
- HIV-1 capsid protein: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.95 Å
- Oligo State
- homo-dimer
- Ligands
- 17 x IOD: IODIDE ION(Non-functional Binders)
- 2 x I3M: Tri-iodode Anion(Non-covalent)
- 23 x FE: FE (III) ION(Non-covalent)(Non-functional Binders)
- 1 x NA: SODIUM ION(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Du, S. et al., Structure of the HIV-1 full-length capsid protein in a conformationally trapped unassembled state induced by small-molecule binding. J.Mol.Biol. (2011)
- Release Date
- 2010-12-01
- Peptides
- HIV-1 capsid protein: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B