SMTL ID : 3nv4.1

Crystal structure of human galectin-9 C-terminal CRD in complex with Sialyllactose

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.99 Å

Oligo State

monomer

Ligands

1 x BGC- GAL- SIA: N-acetyl-alpha-neuraminic acid-(2-3)-beta-D-galactopyranose-(1-4)-beta-D-glucopyranose(Non-covalent)

BGC-GAL-SIA.1: 7 residues within 4Å: Chain A: H.50, N.52, R.54, N.63, W.70, E.73, R.75 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:R.54, A:R.54, A:R.75, A:R.54, A:N.63, A:E.73, A:W.70 Water bridges: A:R.36, A:E.57, A:E.73, A:R.75, A:R.36 Salt bridges: A:H.50

1 x NI: NICKEL (II) ION(Non-covalent)

NI.2: 1 residues within 4Å: Chain A: H.135 2 PLIP interactions: 1 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:H.135, H2O.1

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Yoshida, H. et al., X-ray structures of human galectin-9 C-terminal domain in complexes with a biantennary oligosaccharide and sialyllactose. J.Biol.Chem. (2010)

Release Date

2010-09-22

Peptides

Galectin 9 short isoform variant: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Galectin 9 short isoform variant

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