SMTL ID : 3nzk.1 (1 other biounit)

Structure of LpxC from Yersinia enterocolitica Complexed with CHIR090 Inhibitor

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

monomer

Ligands

1 x C90: N-{(1S,2R)-2-hydroxy-1-[(hydroxyamino)carbonyl]propyl}-4-{[4-(morpholin-4-ylmethyl)phenyl]ethynyl}benzamide(Non-covalent)

C90.1: 19 residues within 4Å: Chain A: L.23, E.83, H.84, T.196, F.197, M.200, I.203, L.206, Q.207, C.212, G.215, S.216, F.217, A.220, V.222, H.243, D.247, H.270 Ligands: ZN.2 12 PLIP interactions: 12 interactions with chain A Hydrophobic interactions: A:L.23, A:I.203, A:I.203, A:I.203, A:L.206, A:A.220, A:V.222 Hydrogen bonds: A:E.83, A:T.196, A:F.197, A:D.247, A:H.270

1 x ZN: ZINC ION(Non-covalent)

ZN.2: 4 residues within 4Å: Chain A: H.84, H.243, D.247 Ligands: C90.1 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:H.84, A:H.243, A:D.247, A:D.247

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.3: 2 residues within 4Å: Chain A: E.139, E.285 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:E.285, A:E.285 Water bridges: A:K.283

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Cole, K.E. et al., Structure of the Metal-Dependent Deacetylase LpxC from Yersinia enterocolitica Complexed with the Potent Inhibitor CHIR-090 . Biochemistry (2010)

Release Date

2011-01-05

Peptides

UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase

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