SMTL ID : 3o3u.1

Crystal Structure of Human Receptor for Advanced Glycation Endproducts (RAGE)

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.50 Å

Oligo State

monomer

Ligands

1 x GLC- GLC- GLC: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose(Non-covalent)

GLC-GLC-GLC.1: 19 residues within 4Å: Chain A: N.12, D.14, K.15, E.44, E.45, W.62, A.63, D.65, R.66, E.111, E.153, P.154, Y.155, F.156, W.230, M.330, W.340, Y.341, R.344 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:E.45, A:R.66, A:R.66 Water bridges: A:D.65, A:M.336

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 4 residues within 4Å: Chain A: P.392, M.452, N.453, R.454 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:N.453, A:R.454 Water bridges: A:M.452, A:N.455 Salt bridges: A:R.454

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Park, H. et al., The 1.5 A crystal structure of human receptor for advanced glycation endproducts (RAGE) ectodomains reveals unique features determining ligand binding. J.Biol.Chem. (2010)

Release Date

2010-10-13

Peptides

Maltose-binding periplasmic protein, Advanced glycosylation end product-specific receptor: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
N

Maltose-binding periplasmic protein, Advanced glycosylation end product-specific receptor