SMTL ID : 3o41.2 (1 other biounit)

Crystal Structure of 101F Fab Bound to 15-mer Peptide Epitope

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.95 Å

Oligo State

hetero-1-1-1-mer

Ligands

6 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 3 residues within 4Å: Chain A: S.168, G.169 Chain B: K.173 4 PLIP interactions: 1 interactions with chain B, 3 interactions with chain A Salt bridges: B:K.173 Hydrogen bonds: A:G.169 Water bridges: A:V.170, A:V.170 SO4.2: 3 residues within 4Å: Chain A: D.214, K.215, K.216 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:K.216, A:K.216 Salt bridges: A:K.215 SO4.3: 3 residues within 4Å: Chain A: K.73, D.74, T.75 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:T.75, A:T.75 Water bridges: A:T.75, A:T.75 Salt bridges: A:K.73 SO4.4: 4 residues within 4Å: Chain B: Q.41, K.43, Q.46, K.49 5 PLIP interactions: 5 interactions with chain B Hydrogen bonds: B:Q.41, B:Q.46 Water bridges: B:K.49 Salt bridges: B:K.43, B:K.49 SO4.5: 4 residues within 4Å: Chain B: V.13, S.14, Q.17, K.111 5 PLIP interactions: 5 interactions with chain B Hydrogen bonds: B:S.14, B:S.14 Water bridges: B:S.14, B:S.14 Salt bridges: B:K.111 SO4.6: 3 residues within 4Å: Chain B: T.186, D.188, R.192 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:T.186, B:E.189 Salt bridges: B:R.192

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

McLellan, J.S. et al., Structure of a Major Antigenic Site on the Respiratory Syncytial Virus Fusion Glycoprotein in Complex with Neutralizing Antibody 101F. J.Virol. (2010)

Release Date

2010-10-13

Peptides

Mouse monoclonal antibody 101F Fab heavy chain: A
Mouse monoclonal antibody 101F Fab light chain: B
Fusion glycoprotein F1: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

Mouse monoclonal antibody 101F Fab heavy chain

Mouse monoclonal antibody 101F Fab light chain

Fusion glycoprotein F1

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