SMTL ID : 3o47.1 (1 other biounit)

Crystal structure of ARFGAP1-ARF1 fusion protein

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.80 Å

Oligo State

homo-dimer

Ligands

2 x ZN: ZINC ION(Non-covalent)

ZN.1: 5 residues within 4Å: Chain A: C.40, C.43, C.60, C.63, E.189 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.40, A:C.43, A:C.60, A:C.63 ZN.3: 5 residues within 4Å: Chain B: C.40, C.43, C.60, C.63, E.189 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:C.40, B:C.43, B:C.60, B:C.63

2 x GDP: GUANOSINE-5'-DIPHOSPHATE(Non-covalent)

GDP.2: 16 residues within 4Å: Chain A: L.173, D.174, A.175, A.176, G.177, K.178, T.179, T.180, D.215, N.274, K.275, D.277, L.278, C.307, A.308, T.309 18 PLIP interactions: 18 interactions with chain A Hydrogen bonds: A:L.173, A:A.175, A:A.176, A:G.177, A:K.178, A:T.179, A:T.179, A:T.179, A:T.180, A:T.180, A:D.215, A:N.274, A:K.275, A:K.275, A:A.308, A:T.309 Salt bridges: A:K.178, A:D.277 GDP.4: 16 residues within 4Å: Chain B: L.173, D.174, A.175, A.176, G.177, K.178, T.179, T.180, D.215, N.274, K.275, D.277, L.278, C.307, A.308, T.309 18 PLIP interactions: 18 interactions with chain B Hydrogen bonds: B:L.173, B:A.175, B:A.176, B:G.177, B:K.178, B:T.179, B:T.179, B:T.179, B:T.180, B:T.180, B:D.215, B:N.274, B:K.275, B:K.275, B:A.308, B:T.309 Salt bridges: B:K.178, B:D.277

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wang, H. et al., Crystal structure of ARFGAP1-ARF1 fusion protein. to be published

Release Date

2010-08-11

Peptides

ADP-ribosylation factor GTPase-activating protein 1, ADP-ribosylation factor 1: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

ADP-ribosylation factor GTPase-activating protein 1, ADP-ribosylation factor 1

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