SMTL ID : 3o4o.1

Crystal structure of an Interleukin-1 receptor complex

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.30 Å

Oligo State

hetero-1-1-1-mer

Ligands

2 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG-NAG.1: 6 residues within 4Å: Chain C: L.12, R.57, Q.58, T.92, G.93, N.94 No protein-ligand interaction detected (PLIP) NAG-NAG.2: 3 residues within 4Å: Chain C: L.127, N.192, T.213 No protein-ligand interaction detected (PLIP)

4 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.3: 2 residues within 4Å: Chain B: N.102, Y.105 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:S.104 NAG.4: 3 residues within 4Å: Chain B: Y.160, Q.207, N.209 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:N.209 NAG.5: 1 residues within 4Å: Chain C: N.90 1 PLIP interactions: 1 interactions with chain C Hydrogen bonds: C:N.90 NAG.6: 2 residues within 4Å: Chain C: N.101, Y.104 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wang, D.L. et al., Structural insights into the assembly and activation of IL-1beta with its receptors. Nat.Immunol. (2010)

Release Date

2010-09-01

Peptides

Interleukin-1 beta: A
Interleukin-1 receptor type 2: B
Interleukin-1 receptor accessory protein: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
C

C
B

Interleukin-1 beta

Interleukin-1 receptor type 2

Interleukin-1 receptor accessory protein

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