SMTL ID : 3o4s.1

Crystal Structure of HePTP with a Closed WPD Loop and an Ordered E-Loop

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

monomer

Ligands

6 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 10 residues within 4Å: Chain A: D.205, H.206, C.239, S.240, A.241, G.242, I.243, G.244, R.245, Q.283 10 PLIP interactions: 10 interactions with chain A Hydrogen bonds: A:D.205, A:A.241, A:G.242, A:I.243, A:G.244, A:R.245, A:Q.283 Water bridges: A:H.206, A:H.206 Salt bridges: A:R.245 SO4.2: 6 residues within 4Å: Chain A: T.143, Q.144, K.151, D.205, S.240, R.245 13 PLIP interactions: 13 interactions with chain A Hydrogen bonds: A:T.143, A:Q.144, A:D.205, A:S.240 Water bridges: A:K.151, A:K.151, A:K.151, A:D.205, A:S.240, A:R.245, A:R.245 Salt bridges: A:K.151, A:R.245 SO4.3: 4 residues within 4Å: Chain A: P.29, L.30, T.31, A.34 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:T.31, A:T.31 SO4.4: 5 residues within 4Å: Chain A: H.154, W.156, P.157, T.158, R.182 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:W.156 Water bridges: A:H.154, A:H.154, A:R.182 Salt bridges: A:H.154, A:R.182 SO4.5: 3 residues within 4Å: Chain A: R.24, R.104, L.276 4 PLIP interactions: 4 interactions with chain A Water bridges: A:R.24, A:D.277 Salt bridges: A:R.24, A:R.104 SO4.6: 5 residues within 4Å: Chain A: Q.90, S.91, Q.92, G.164, P.165 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:S.91, A:Q.92, A:Q.92 Water bridges: A:S.125

5 x GOL: GLYCEROL(Non-functional Binders)

GOL.7: 2 residues within 4Å: Chain A: E.161, Y.163 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:E.161, A:E.161 Water bridges: A:Y.163 GOL.8: 4 residues within 4Å: Chain A: Y.73, K.151, D.205, H.206 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:Y.73, A:Y.73, A:K.151, A:D.205 Water bridges: A:K.151 GOL.9: 5 residues within 4Å: Chain A: R.32, A.299, G.300, L.302, E.304 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:R.32, A:L.302 Water bridges: A:L.302, A:P.303 GOL.10: 5 residues within 4Å: Chain A: L.35, P.39, H.292, H.293, A.296 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:L.35 Water bridges: A:H.293 GOL.11: 1 residues within 4Å: Chain A: Q.92 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Critton, D.A. et al., Visualizing active-site dynamics in single crystals of HePTP: opening of the WPD loop involves coordinated movement of the E loop. J.Mol.Biol. (2011)

Release Date

2010-11-24

Peptides

Tyrosine-protein phosphatase non-receptor type 7: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Tyrosine-protein phosphatase non-receptor type 7

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