SMTL ID : 3o6m.1

Anti-Tat HIV 11H6H1 Fab' complexed with a 9-mer Tat peptide

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.40 Å

Oligo State

hetero-1-1-mer

Ligands

1 x PRO- LYS- LEU- GLU- PRO- TRP- LYS- HIS- PRO: Protein Tat 9-mer peptide(Non-covalent)

PRO-LYS-LEU-GLU-PRO-TRP-LYS-HIS-PRO.1: 16 residues within 4Å: Chain A: Y.31, Y.37, W.94, G.96, T.97, F.99, R.101 Chain B: D.33, S.50, Y.57, Y.59, D.99, Y.100, D.101, Y.102, G.103 20 PLIP interactions: 10 interactions with chain B, 10 interactions with chain A Hydrophobic interactions: B:Y.57, B:Y.59, B:Y.102, A:Y.31, A:Y.31, A:Y.37, A:Y.37, A:F.99, A:R.101 Hydrogen bonds: B:D.33, B:Y.59, B:Y.59, B:D.99, B:Y.102, A:G.96 pi-Stacking: B:Y.57, B:Y.59 Water bridges: A:G.96, A:R.101 Salt bridges: A:R.101

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Serriere, J. et al., Fab'-induced folding of antigenic N-terminal peptides from intrinsically disordered HIV-1 Tat revealed by X-ray crystallography. J.Mol.Biol. (2011)

Release Date

2010-11-10

Peptides

11H6H1 Fab' light chain: A
11H6H1 Fab' heavy chain: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
L

B
H

11H6H1 Fab' light chain

11H6H1 Fab' heavy chain

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