SMTL ID : 3o8p.1

Conformational plasticity of p38 MAP kinase DFG motif mutants in response to inhibitor binding

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

monomer

Ligands

1 x BMU: 1-(5-TERT-BUTYL-2-METHYL-2H-PYRAZOL-3-YL)-3-(4-CHLORO-PHENYL)-UREA(Non-covalent)

BMU.1: 12 residues within 4Å: Chain A: K.53, E.71, L.74, L.75, M.78, I.84, L.104, T.106, H.148, L.167, G.168, F.169 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:K.53, A:L.75, A:I.84, A:I.84, A:L.104 Hydrogen bonds: A:E.71, A:E.71, A:G.168, A:F.169 Water bridges: A:K.53 pi-Cation interactions: A:K.53

1 x BOG: octyl beta-D-glucopyranoside(Non-covalent)

BOG.2: 15 residues within 4Å: Chain A: P.191, L.195, W.197, H.199, Y.200, N.201, L.232, L.236, L.246, K.249, I.259, L.291, D.292, S.293, D.294 13 PLIP interactions: 13 interactions with chain A Hydrophobic interactions: A:W.197, A:L.232, A:L.236, A:L.246, A:I.259 Hydrogen bonds: A:H.199, A:N.201, A:K.249, A:K.249, A:D.292, A:S.293, A:S.293 Water bridges: A:E.192

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.3: 4 residues within 4Å: Chain A: H.107, L.108, M.109, L.167 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:M.109 Water bridges: A:H.107, A:G.110

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Namboodiri, H.V. et al., Conformational plasticity of p38 MAP kinase DFG motif mutants in response to inhibitor binding. To be Published

Release Date

2010-09-01

Peptides

Mitogen-activated protein kinase 14: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Mitogen-activated protein kinase 14

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