SMTL ID : 3obi.2 (2 other biounits)

Crystal structure of a formyltetrahydrofolate deformylase (NP_949368) from RHODOPSEUDOMONAS PALUSTRIS CGA009 at 1.95 A resolution

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.95 Å

Oligo State

homo-dimer

Ligands

11 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.1: 3 residues within 4Å: Chain A: Y.108, R.111, D.135 No protein-ligand interaction detected (PLIP) EDO.2: 4 residues within 4Å: Chain A: R.254, K.255, D.258, R.261 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:R.254, A:R.261 EDO.3: 6 residues within 4Å: Chain A: R.90, Y.270, H.271, D.274, R.275, V.276 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:R.90, A:D.274, A:D.274, A:R.275, A:V.276, A:V.276 EDO.4: 7 residues within 4Å: Chain A: R.84, T.88, R.89, R.90, H.116, M.117, L.272 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:R.90, A:R.90, A:R.90, A:H.116 EDO.5: 5 residues within 4Å: Chain A: S.12, H.47, L.278, N.279, G.280 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:S.12, A:S.12, A:S.45, A:S.45 Water bridges: A:G.280 EDO.6: 3 residues within 4Å: Chain A: F.144, P.145, Q.154 1 PLIP interactions: 1 interactions with chain A Water bridges: A:T.150 EDO.7: 2 residues within 4Å: Chain A: R.128, E.129 1 PLIP interactions: 1 interactions with chain A Water bridges: A:R.128 EDO.8: 2 residues within 4Å: Chain A: A.250, V.253 2 PLIP interactions: 2 interactions with chain A Water bridges: A:A.250, A:R.257 EDO.9: 3 residues within 4Å: Chain B: F.144, P.145, Q.154 No protein-ligand interaction detected (PLIP) EDO.10: 7 residues within 4Å: Chain B: T.10, R.90, Y.270, H.271, D.274, R.275, V.276 4 PLIP interactions: 4 interactions with chain B Hydrogen bonds: B:R.90, B:D.274, B:R.275, B:V.276 EDO.11: 4 residues within 4Å: Chain B: Y.108, R.111, V.112, D.135 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Joint Center for Structural Genomics (JCSG), Crystal structure of a formyltetrahydrofolate deformylase (NP_949368) from RHODOPSEUDOMONAS PALUSTRIS CGA009 at 1.95 A resolution. To be published

Release Date

2010-08-18

Peptides

Formyltetrahydrofolate deformylase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
D

Formyltetrahydrofolate deformylase

Related Entries With Identical Sequence