SMTL ID : 3of9.1

Structural Basis for Irreversible Inhibition of Human Cathepsin L by a Diazomethylketone Inhibitor

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.76 Å

Oligo State

monomer

Ligands

1 x I0X: Nalpha-[(benzyloxy)carbonyl]-N-[(1S)-1-(4-tert-butoxybenzyl)-3-diazo-2-oxopropyl]-L-phenylalaninamide(Covalent)

I0X.1: 19 residues within 4Å: Chain A: Q.20, G.24, S.25, C.26, W.27, G.62, E.64, G.68, G.69, L.70, M.71, A.136, A.139, L.145, M.162, D.163, H.164, G.165, W.190 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:E.64, A:L.70, A:A.136, A:L.145, A:H.164, A:W.190 Hydrogen bonds: A:Q.20, A:C.26, A:G.69, A:G.69, A:D.163

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Shenoy, R.T. et al., Structural basis for reversible and irreversible inhibition of human cathepsin L by their respective dipeptidyl glyoxal and diazomethylketone inhibitors. J.Struct.Biol. (2011)

Release Date

2010-12-08

Peptides

Cathepsin L1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Cathepsin L1

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