SMTL ID : 3omv.1

Crystal structure of c-raf (raf-1)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 4.00 Å

Oligo State

homo-dimer

Ligands

2 x SM5: (1E)-5-(1-piperidin-4-yl-3-pyridin-4-yl-1H-pyrazol-4-yl)-2,3-dihydro-1H-inden-1-one oxime(Non-covalent)

SM5.1: 12 residues within 4Å: Chain A: I.44, V.52, A.62, K.64, E.82, T.110, W.112, C.113, K.120, N.161, F.164, D.175 14 PLIP interactions: 14 interactions with chain A Hydrophobic interactions: A:V.52, A:V.52, A:A.62, A:K.64, A:T.110, A:W.112, A:F.164, A:D.175 Hydrogen bonds: A:K.64, A:E.82, A:C.113, A:K.120, A:K.120 pi-Stacking: A:F.164 SM5.2: 12 residues within 4Å: Chain B: I.44, V.52, A.62, K.64, E.82, L.95, I.108, T.110, C.113, S.117, K.120, F.164 12 PLIP interactions: 12 interactions with chain B Hydrophobic interactions: B:I.44, B:V.52, B:V.52, B:A.62, B:L.95, B:T.110, B:F.164, B:F.164, B:F.164 Hydrogen bonds: B:K.64, B:C.113, B:K.120

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Hatzivassiliou, G. et al., RAF inhibitors prime wild-type RAF to activate the MAPK pathway and enhance growth. Nature (2010)

Release Date

2010-09-15

Peptides

RAF proto-oncogene serine/threonine-protein kinase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

RAF proto-oncogene serine/threonine-protein kinase