- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.50 Å
- Oligo State
- homo-15-mer
- Ligands
- 15 x GLU: GLUTAMIC ACID(Non-covalent)
- 15 x G6P: 6-O-phosphono-alpha-D-glucopyranose(Non-covalent)
G6P.2: 12 residues within 4Å:- Chain A: C.300, T.302, S.303, S.347, Q.348, S.349, T.352, V.399, S.401, E.488, A.602, K.603
17 PLIP interactions:17 interactions with chain A- Hydrogen bonds: A:T.302, A:T.302, A:S.303, A:S.303, A:Q.348, A:S.349, A:S.349, A:T.352, A:T.352, A:S.401, A:E.488, A:A.602, A:A.602
- Water bridges: A:T.302, A:Q.348, A:T.355, A:A.602
G6P.6: 11 residues within 4Å:- Chain B: C.300, T.302, S.303, S.347, Q.348, S.349, T.352, V.399, S.401, A.602, K.603
18 PLIP interactions:18 interactions with chain B- Hydrogen bonds: B:T.302, B:T.302, B:S.303, B:S.303, B:Q.348, B:S.349, B:S.349, B:T.352, B:T.352, B:V.399, B:S.401, B:A.602, B:A.602
- Water bridges: B:C.300, B:T.302, B:Q.348, B:S.401, B:E.488
G6P.10: 14 residues within 4Å:- Chain C: C.300, T.302, S.303, S.347, Q.348, S.349, T.352, V.399, A.400, S.401, E.488, A.602, K.603
- Chain D: H.504
18 PLIP interactions:17 interactions with chain C, 1 interactions with chain D- Hydrogen bonds: C:T.302, C:T.302, C:S.303, C:S.303, C:Q.348, C:S.349, C:S.349, C:T.352, C:T.352, C:S.401, C:E.488, C:A.602, C:A.602
- Water bridges: C:T.302, C:Q.348, C:E.488, C:A.602
- Salt bridges: D:H.504
G6P.14: 13 residues within 4Å:- Chain C: H.504
- Chain D: C.300, T.302, S.303, S.347, Q.348, S.349, T.352, V.399, S.401, E.488, A.602, K.603
18 PLIP interactions:17 interactions with chain D, 1 interactions with chain C- Hydrogen bonds: D:T.302, D:T.302, D:T.302, D:S.303, D:S.303, D:Q.348, D:S.349, D:S.349, D:T.352, D:T.352, D:S.401, D:E.488, D:A.602, D:A.602
- Water bridges: D:C.300, D:Q.348, D:A.602
- Salt bridges: C:H.504
G6P.18: 12 residues within 4Å:- Chain E: C.300, T.302, S.303, S.347, Q.348, S.349, T.352, V.399, S.401, E.488, A.602, K.603
17 PLIP interactions:17 interactions with chain E- Hydrogen bonds: E:T.302, E:T.302, E:S.303, E:S.303, E:Q.348, E:S.349, E:T.352, E:T.352, E:T.352, E:V.399, E:S.401, E:A.602, E:A.602
- Water bridges: E:T.302, E:Q.348, E:T.355, E:A.602
G6P.22: 12 residues within 4Å:- Chain F: C.300, T.302, S.303, S.347, Q.348, S.349, T.352, V.399, S.401, E.488, A.602, K.603
17 PLIP interactions:17 interactions with chain F- Hydrogen bonds: F:T.302, F:T.302, F:S.303, F:S.303, F:Q.348, F:S.349, F:S.349, F:T.352, F:T.352, F:S.401, F:E.488, F:A.602, F:A.602
- Water bridges: F:T.302, F:Q.348, F:T.355, F:A.602
G6P.26: 11 residues within 4Å:- Chain G: C.300, T.302, S.303, S.347, Q.348, S.349, T.352, V.399, S.401, A.602, K.603
18 PLIP interactions:18 interactions with chain G- Hydrogen bonds: G:T.302, G:T.302, G:S.303, G:S.303, G:Q.348, G:S.349, G:S.349, G:T.352, G:T.352, G:V.399, G:S.401, G:A.602, G:A.602
- Water bridges: G:C.300, G:T.302, G:Q.348, G:S.401, G:E.488
G6P.30: 14 residues within 4Å:- Chain H: C.300, T.302, S.303, S.347, Q.348, S.349, T.352, V.399, A.400, S.401, E.488, A.602, K.603
- Chain I: H.504
18 PLIP interactions:17 interactions with chain H, 1 interactions with chain I- Hydrogen bonds: H:T.302, H:T.302, H:S.303, H:S.303, H:Q.348, H:S.349, H:S.349, H:T.352, H:T.352, H:S.401, H:E.488, H:A.602, H:A.602
- Water bridges: H:T.302, H:Q.348, H:E.488, H:A.602
- Salt bridges: I:H.504
G6P.34: 13 residues within 4Å:- Chain H: H.504
- Chain I: C.300, T.302, S.303, S.347, Q.348, S.349, T.352, V.399, S.401, E.488, A.602, K.603
18 PLIP interactions:1 interactions with chain H, 17 interactions with chain I- Salt bridges: H:H.504
- Hydrogen bonds: I:T.302, I:T.302, I:T.302, I:S.303, I:S.303, I:Q.348, I:S.349, I:S.349, I:T.352, I:T.352, I:S.401, I:E.488, I:A.602, I:A.602
- Water bridges: I:C.300, I:Q.348, I:A.602
G6P.38: 12 residues within 4Å:- Chain J: C.300, T.302, S.303, S.347, Q.348, S.349, T.352, V.399, S.401, E.488, A.602, K.603
17 PLIP interactions:17 interactions with chain J- Hydrogen bonds: J:T.302, J:T.302, J:S.303, J:S.303, J:Q.348, J:S.349, J:T.352, J:T.352, J:T.352, J:V.399, J:S.401, J:A.602, J:A.602
- Water bridges: J:T.302, J:Q.348, J:T.355, J:A.602
G6P.42: 12 residues within 4Å:- Chain K: C.300, T.302, S.303, S.347, Q.348, S.349, T.352, V.399, S.401, E.488, A.602, K.603
17 PLIP interactions:17 interactions with chain K- Hydrogen bonds: K:T.302, K:T.302, K:S.303, K:S.303, K:Q.348, K:S.349, K:S.349, K:T.352, K:T.352, K:S.401, K:E.488, K:A.602, K:A.602
- Water bridges: K:T.302, K:Q.348, K:T.355, K:A.602
G6P.46: 11 residues within 4Å:- Chain L: C.300, T.302, S.303, S.347, Q.348, S.349, T.352, V.399, S.401, A.602, K.603
18 PLIP interactions:18 interactions with chain L- Hydrogen bonds: L:T.302, L:T.302, L:S.303, L:S.303, L:Q.348, L:S.349, L:S.349, L:T.352, L:T.352, L:V.399, L:S.401, L:A.602, L:A.602
- Water bridges: L:C.300, L:T.302, L:Q.348, L:S.401, L:E.488
G6P.50: 14 residues within 4Å:- Chain M: C.300, T.302, S.303, S.347, Q.348, S.349, T.352, V.399, A.400, S.401, E.488, A.602, K.603
- Chain N: H.504
18 PLIP interactions:17 interactions with chain M, 1 interactions with chain N- Hydrogen bonds: M:T.302, M:T.302, M:S.303, M:S.303, M:Q.348, M:S.349, M:S.349, M:T.352, M:T.352, M:S.401, M:E.488, M:A.602, M:A.602
- Water bridges: M:T.302, M:Q.348, M:E.488, M:A.602
- Salt bridges: N:H.504
G6P.54: 13 residues within 4Å:- Chain M: H.504
- Chain N: C.300, T.302, S.303, S.347, Q.348, S.349, T.352, V.399, S.401, E.488, A.602, K.603
18 PLIP interactions:17 interactions with chain N, 1 interactions with chain M- Hydrogen bonds: N:T.302, N:T.302, N:T.302, N:S.303, N:S.303, N:Q.348, N:S.349, N:S.349, N:T.352, N:T.352, N:S.401, N:E.488, N:A.602, N:A.602
- Water bridges: N:C.300, N:Q.348, N:A.602
- Salt bridges: M:H.504
G6P.58: 12 residues within 4Å:- Chain O: C.300, T.302, S.303, S.347, Q.348, S.349, T.352, V.399, S.401, E.488, A.602, K.603
17 PLIP interactions:17 interactions with chain O- Hydrogen bonds: O:T.302, O:T.302, O:S.303, O:S.303, O:Q.348, O:S.349, O:T.352, O:T.352, O:T.352, O:V.399, O:S.401, O:A.602, O:A.602
- Water bridges: O:T.302, O:Q.348, O:T.355, O:A.602
- 15 x GOL: GLYCEROL(Non-functional Binders)
GOL.3: 5 residues within 4Å:- Chain A: H.466, L.509, D.511, D.513, M.514
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:L.509, A:D.511
GOL.7: 5 residues within 4Å:- Chain B: H.466, L.509, D.511, D.513, M.514
3 PLIP interactions:3 interactions with chain B- Hydrogen bonds: B:L.509, B:D.511
- Water bridges: B:D.513
GOL.11: 9 residues within 4Å:- Chain C: H.466, L.509, D.511, D.513, M.514
- Chain D: H.465, Y.491, I.492, H.493
5 PLIP interactions:3 interactions with chain C, 2 interactions with chain D- Hydrogen bonds: C:L.509, C:D.511, D:H.465, D:H.493
- Water bridges: C:D.513
GOL.15: 9 residues within 4Å:- Chain C: H.465, Y.491, I.492, H.493, R.599
- Chain D: H.466, L.509, D.511, M.514
6 PLIP interactions:5 interactions with chain C, 1 interactions with chain D- Hydrogen bonds: C:H.465, C:Y.491, C:H.493, C:R.599, D:D.511
- Water bridges: C:H.465
GOL.19: 4 residues within 4Å:- Chain E: H.466, L.509, D.511, D.513
1 PLIP interactions:1 interactions with chain E- Hydrogen bonds: E:D.511
GOL.23: 5 residues within 4Å:- Chain F: H.466, L.509, D.511, D.513, M.514
2 PLIP interactions:2 interactions with chain F- Hydrogen bonds: F:L.509, F:D.511
GOL.27: 5 residues within 4Å:- Chain G: H.466, L.509, D.511, D.513, M.514
3 PLIP interactions:3 interactions with chain G- Hydrogen bonds: G:L.509, G:D.511
- Water bridges: G:D.513
GOL.31: 9 residues within 4Å:- Chain H: H.466, L.509, D.511, D.513, M.514
- Chain I: H.465, Y.491, I.492, H.493
5 PLIP interactions:3 interactions with chain H, 2 interactions with chain I- Hydrogen bonds: H:L.509, H:D.511, I:H.465, I:H.493
- Water bridges: H:D.513
GOL.35: 9 residues within 4Å:- Chain H: H.465, Y.491, I.492, H.493, R.599
- Chain I: H.466, L.509, D.511, M.514
6 PLIP interactions:5 interactions with chain H, 1 interactions with chain I- Hydrogen bonds: H:H.465, H:Y.491, H:H.493, H:R.599, I:D.511
- Water bridges: H:H.465
GOL.39: 4 residues within 4Å:- Chain J: H.466, L.509, D.511, D.513
1 PLIP interactions:1 interactions with chain J- Hydrogen bonds: J:D.511
GOL.43: 5 residues within 4Å:- Chain K: H.466, L.509, D.511, D.513, M.514
2 PLIP interactions:2 interactions with chain K- Hydrogen bonds: K:L.509, K:D.511
GOL.47: 5 residues within 4Å:- Chain L: H.466, L.509, D.511, D.513, M.514
3 PLIP interactions:3 interactions with chain L- Hydrogen bonds: L:L.509, L:D.511
- Water bridges: L:D.513
GOL.51: 9 residues within 4Å:- Chain M: H.466, L.509, D.511, D.513, M.514
- Chain N: H.465, Y.491, I.492, H.493
5 PLIP interactions:2 interactions with chain N, 3 interactions with chain M- Hydrogen bonds: N:H.465, N:H.493, M:L.509, M:D.511
- Water bridges: M:D.513
GOL.55: 9 residues within 4Å:- Chain M: H.465, Y.491, I.492, H.493, R.599
- Chain N: H.466, L.509, D.511, M.514
6 PLIP interactions:1 interactions with chain N, 5 interactions with chain M- Hydrogen bonds: N:D.511, M:H.465, M:Y.491, M:H.493, M:R.599
- Water bridges: M:H.465
GOL.59: 4 residues within 4Å:- Chain O: H.466, L.509, D.511, D.513
1 PLIP interactions:1 interactions with chain O- Hydrogen bonds: O:D.511
- 15 x G6Q: GLUCOSE-6-PHOSPHATE(Non-covalent)
G6Q.4: 5 residues within 4Å:- Chain A: S.316, D.474, Q.475, E.569, A.572
8 PLIP interactions:8 interactions with chain A- Hydrogen bonds: A:S.316, A:S.316, A:D.474, A:Q.475, A:E.569, A:E.569
- Water bridges: A:D.474, A:D.474
G6Q.8: 6 residues within 4Å:- Chain B: S.316, D.474, Q.475, E.569, A.572, P.573
8 PLIP interactions:8 interactions with chain B- Hydrogen bonds: B:S.316, B:Q.475, B:E.569
- Water bridges: B:D.474, B:D.474, B:D.474, B:E.569, B:E.569
G6Q.12: 8 residues within 4Å:- Chain C: S.316, D.474, Q.475, E.569, A.572
- Chain D: Y.332, R.333, K.334
8 PLIP interactions:6 interactions with chain C, 2 interactions with chain D- Hydrogen bonds: C:S.316, C:D.474, C:Q.475, C:E.569, D:Y.332, D:K.334
- Water bridges: C:D.474, C:D.474
G6Q.16: 9 residues within 4Å:- Chain C: Y.332, R.333, K.334
- Chain D: S.316, D.474, Q.475, E.569, A.572, P.573
8 PLIP interactions:7 interactions with chain D, 1 interactions with chain C- Hydrogen bonds: D:S.316, D:D.474, D:Q.475, D:E.569, C:K.334
- Water bridges: D:D.474, D:D.474, D:D.474
G6Q.20: 6 residues within 4Å:- Chain E: S.316, D.474, Q.475, E.569, A.572, P.573
6 PLIP interactions:6 interactions with chain E- Hydrogen bonds: E:D.474, E:Q.475, E:E.569
- Water bridges: E:S.316, E:S.316, E:S.316
G6Q.24: 5 residues within 4Å:- Chain F: S.316, D.474, Q.475, E.569, A.572
8 PLIP interactions:8 interactions with chain F- Hydrogen bonds: F:S.316, F:S.316, F:D.474, F:Q.475, F:E.569, F:E.569
- Water bridges: F:D.474, F:D.474
G6Q.28: 6 residues within 4Å:- Chain G: S.316, D.474, Q.475, E.569, A.572, P.573
8 PLIP interactions:8 interactions with chain G- Hydrogen bonds: G:S.316, G:Q.475, G:E.569
- Water bridges: G:D.474, G:D.474, G:D.474, G:E.569, G:E.569
G6Q.32: 8 residues within 4Å:- Chain H: S.316, D.474, Q.475, E.569, A.572
- Chain I: Y.332, R.333, K.334
8 PLIP interactions:6 interactions with chain H, 2 interactions with chain I- Hydrogen bonds: H:S.316, H:D.474, H:Q.475, H:E.569, I:Y.332, I:K.334
- Water bridges: H:D.474, H:D.474
G6Q.36: 9 residues within 4Å:- Chain H: Y.332, R.333, K.334
- Chain I: S.316, D.474, Q.475, E.569, A.572, P.573
8 PLIP interactions:7 interactions with chain I, 1 interactions with chain H- Hydrogen bonds: I:S.316, I:D.474, I:Q.475, I:E.569, H:K.334
- Water bridges: I:D.474, I:D.474, I:D.474
G6Q.40: 6 residues within 4Å:- Chain J: S.316, D.474, Q.475, E.569, A.572, P.573
6 PLIP interactions:6 interactions with chain J- Hydrogen bonds: J:D.474, J:Q.475, J:E.569
- Water bridges: J:S.316, J:S.316, J:S.316
G6Q.44: 5 residues within 4Å:- Chain K: S.316, D.474, Q.475, E.569, A.572
8 PLIP interactions:8 interactions with chain K- Hydrogen bonds: K:S.316, K:S.316, K:D.474, K:Q.475, K:E.569, K:E.569
- Water bridges: K:D.474, K:D.474
G6Q.48: 6 residues within 4Å:- Chain L: S.316, D.474, Q.475, E.569, A.572, P.573
8 PLIP interactions:8 interactions with chain L- Hydrogen bonds: L:S.316, L:Q.475, L:E.569
- Water bridges: L:D.474, L:D.474, L:D.474, L:E.569, L:E.569
G6Q.52: 8 residues within 4Å:- Chain M: S.316, D.474, Q.475, E.569, A.572
- Chain N: Y.332, R.333, K.334
8 PLIP interactions:2 interactions with chain N, 6 interactions with chain M- Hydrogen bonds: N:Y.332, N:K.334, M:S.316, M:D.474, M:Q.475, M:E.569
- Water bridges: M:D.474, M:D.474
G6Q.56: 9 residues within 4Å:- Chain M: Y.332, R.333, K.334
- Chain N: S.316, D.474, Q.475, E.569, A.572, P.573
8 PLIP interactions:7 interactions with chain N, 1 interactions with chain M- Hydrogen bonds: N:S.316, N:D.474, N:Q.475, N:E.569, M:K.334
- Water bridges: N:D.474, N:D.474, N:D.474
G6Q.60: 6 residues within 4Å:- Chain O: S.316, D.474, Q.475, E.569, A.572, P.573
6 PLIP interactions:6 interactions with chain O- Hydrogen bonds: O:D.474, O:Q.475, O:E.569
- Water bridges: O:S.316, O:S.316, O:S.316
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Mouilleron, S. et al., Structural basis for morpheein-type allosteric regulation of Escherichia coli glucosamine-6-phosphate synthase: equilibrium between inactive hexamer and active dimer. J.Biol.Chem. (2012)
- Release Date
- 2011-10-19
- Peptides
- Glucosamine/fructose-6-phosphate aminotransferase, isomerizing: ABCDEFGHIJKLMNO
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
BB
DC
ED
FE
HF
BG
DH
EI
FJ
HK
BL
DM
EN
FO
H
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.50 Å
- Oligo State
- homo-15-mer
- Ligands
- 15 x GLU: GLUTAMIC ACID(Non-covalent)
- 15 x G6P: 6-O-phosphono-alpha-D-glucopyranose(Non-covalent)
- 15 x GOL: GLYCEROL(Non-functional Binders)
- 15 x G6Q: GLUCOSE-6-PHOSPHATE(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Mouilleron, S. et al., Structural basis for morpheein-type allosteric regulation of Escherichia coli glucosamine-6-phosphate synthase: equilibrium between inactive hexamer and active dimer. J.Biol.Chem. (2012)
- Release Date
- 2011-10-19
- Peptides
- Glucosamine/fructose-6-phosphate aminotransferase, isomerizing: ABCDEFGHIJKLMNO
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
BB
DC
ED
FE
HF
BG
DH
EI
FJ
HK
BL
DM
EN
FO
H