SMTL ID : 3out.1 (2 other biounits)

Crystal structure of glutamate racemase from Francisella tularensis subsp. tularensis SCHU S4 in complex with D-glutamate.

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.65 Å

Oligo State

homo-hexamer

Ligands

6 x DGL: D-GLUTAMIC ACID(Non-covalent)

DGL.1: 13 residues within 4Å: Chain A: S.15, G.16, I.44, P.45, Y.46, G.47, C.77, N.78, T.79, T.119, C.186, T.187, H.188 13 PLIP interactions: 13 interactions with chain A Hydrogen bonds: A:S.15, A:S.15, A:G.16, A:Y.46, A:G.47, A:N.78, A:N.78, A:T.79, A:T.79, A:T.187, A:T.187 Water bridges: A:G.18, A:T.122 DGL.2: 12 residues within 4Å: Chain B: S.15, G.16, P.45, Y.46, G.47, C.77, N.78, T.79, T.119, C.186, T.187, H.188 13 PLIP interactions: 13 interactions with chain B Hydrogen bonds: B:S.15, B:S.15, B:G.16, B:Y.46, B:G.47, B:N.78, B:N.78, B:T.79, B:T.79, B:T.187, B:T.187 Water bridges: B:G.18, B:T.122 DGL.3: 13 residues within 4Å: Chain C: S.15, G.16, I.44, P.45, Y.46, G.47, C.77, N.78, T.79, T.119, C.186, T.187, H.188 15 PLIP interactions: 15 interactions with chain C Hydrophobic interactions: C:T.119 Hydrogen bonds: C:S.15, C:S.15, C:S.15, C:G.16, C:Y.46, C:G.47, C:N.78, C:N.78, C:T.79, C:T.79, C:T.187, C:T.187 Water bridges: C:G.18, C:T.122 DGL.4: 13 residues within 4Å: Chain D: S.15, G.16, I.44, P.45, Y.46, G.47, C.77, N.78, T.79, T.119, C.186, T.187, H.188 11 PLIP interactions: 11 interactions with chain D Hydrogen bonds: D:S.15, D:S.15, D:G.16, D:Y.46, D:G.47, D:N.78, D:N.78, D:T.79, D:T.187, D:T.187 Water bridges: D:G.18 DGL.5: 12 residues within 4Å: Chain E: S.15, G.16, P.45, Y.46, G.47, C.77, N.78, T.79, T.119, C.186, T.187, H.188 11 PLIP interactions: 11 interactions with chain E Hydrogen bonds: E:S.15, E:S.15, E:G.16, E:Y.46, E:G.47, E:N.78, E:N.78, E:T.79, E:T.187, E:T.187 Water bridges: E:G.18 DGL.6: 13 residues within 4Å: Chain F: S.15, G.16, I.44, P.45, Y.46, G.47, C.77, N.78, T.79, T.119, C.186, T.187, H.188 13 PLIP interactions: 13 interactions with chain F Hydrophobic interactions: F:T.119 Hydrogen bonds: F:S.15, F:S.15, F:S.15, F:G.16, F:Y.46, F:G.47, F:N.78, F:N.78, F:T.79, F:T.187, F:T.187 Water bridges: F:G.18

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Filippova, E.V. et al., Crystal structure of glutamate racemase from Francisella tularensis subsp. tularensis SCHU S4 in complex with D-glutamate. To be Published

Release Date

2010-09-29

Peptides

Glutamate racemase: ABCDEF

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
A

E
B

F
C

Glutamate racemase

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