SMTL ID : 3oz9.1

Crystal Structure of anti-gp41 Fab NC-1

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.60 Å

Oligo State

hetero-1-1-mer

Ligands

4 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 6 residues within 4Å: Chain A: Y.48, A.54, S.55 Chain B: Y.100, W.105, A.107 2 PLIP interactions: 1 interactions with chain A, 1 interactions with chain B Hydrogen bonds: A:S.55, B:W.105 GOL.2: 2 residues within 4Å: Chain A: G.65, S.66 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:G.65, A:G.65 Water bridges: A:S.64, A:S.64 GOL.3: 6 residues within 4Å: Chain B: E.154, P.155, V.156, P.173, A.174, L.183 5 PLIP interactions: 5 interactions with chain B Hydrogen bonds: B:V.156, B:V.156, B:A.174 Water bridges: B:E.154, B:E.154 GOL.4: 5 residues within 4Å: Chain A: S.30, H.33, W.90 Chain B: P.103, T.104 3 PLIP interactions: 1 interactions with chain B, 2 interactions with chain A Hydrogen bonds: B:T.104, A:S.30 Water bridges: A:W.90

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Stanfield, R.L. et al., Crystal Structure of anti-gp41 Fab NC-1. TO BE PUBLISHED

Release Date

2010-10-06

Peptides

Fab NC-1 kappa light chain: A
Fab NC-1 IgG2a heavy chain: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
L

B
H

Fab NC-1 kappa light chain

Fab NC-1 IgG2a heavy chain