SMTL ID : 3ozu.1 (1 other biounit)

The Crystal Structure of flavohemoglobin from R. eutrophus in complex with miconazole

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

monomer

Ligands

1 x HEM: PROTOPORPHYRIN IX CONTAINING FE(Non-covalent)

HEM.1: 19 residues within 4Å: Chain A: V.42, F.43, N.44, A.60, N.80, I.81, K.84, H.85, L.88, V.90, Q.94, Y.95, V.98, Y.126, L.129, A.130, L.133 Ligands: X89.3, PO4.4 24 PLIP interactions: 24 interactions with chain A, Hydrophobic interactions: A:V.42, A:F.43, A:F.43, A:F.43, A:F.43, A:A.60, A:I.81, A:I.81, A:I.81, A:L.88, A:Y.95, A:V.98, A:Y.126, A:L.129, A:A.130, A:L.133 Hydrogen bonds: A:Y.29, A:Y.29, A:N.44, A:N.80 Water bridges: A:K.84, A:K.84 Salt bridges: A:K.84 Metal complexes: A:H.85

1 x FAD: FLAVIN-ADENINE DINUCLEOTIDE(Non-covalent)

FAD.2: 25 residues within 4Å: Chain A: N.44, A.46, H.47, E.49, Y.190, R.206, Q.207, Y.208, S.209, S.222, V.223, K.224, E.226, G.227, Q.231, P.232, P.233, G.234, Y.235, V.236, S.237, E.394, V.395, G.397, P.398 21 PLIP interactions: 21 interactions with chain A Hydrophobic interactions: A:Y.190, A:Q.207, A:E.394, A:V.395 Hydrogen bonds: A:N.44, A:Q.207, A:Q.207, A:S.209, A:S.222, A:K.224, A:E.226, A:E.226, A:Q.231, A:Y.235, A:V.236, A:S.237, A:G.397 Water bridges: A:S.222 Salt bridges: A:R.206, A:R.206 pi-Stacking: A:Y.208

1 x X89: 1-[(2R)-2-[(2,4-dichlorobenzyl)oxy]-2-(2,4-dichlorophenyl)ethyl]-1H-imidazole(Non-covalent)

X89.3: 15 residues within 4Å: Chain A: I.25, F.28, Y.29, F.43, A.56, L.57, V.61, H.85, L.102, W.122, A.125, Y.126, L.129 Ligands: HEM.1, PO4.4 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:I.25, A:L.57, A:L.102, A:W.122, A:Y.126

1 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.4: 6 residues within 4Å: Chain A: A.60, V.61, Y.64, L.129 Ligands: HEM.1, X89.3 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:A.60

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

El Hammi, E. et al., Structure of Ralstonia eutropha Flavohemoglobin in Complex with Three Antibiotic Azole Compounds. Biochemistry (2011)

Release Date

2011-03-16

Peptides

Flavohemoprotein: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Flavohemoprotein

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