SMTL ID : 3p05.1

X-ray structure of pentameric HIV-1 CA

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

homo-pentamer

Ligands

10 x IOD: IODIDE ION(Non-functional Binders)

IOD.1: 1 residues within 4Å: Chain A: Y.169 Ligand excluded by PLIP IOD.2: 3 residues within 4Å: Chain A: R.162, Q.219 Chain B: M.144 Ligand excluded by PLIP IOD.3: 7 residues within 4Å: Chain A: S.33, P.34, E.35, K.170, R.173 Chain B: G.61, Q.63 Ligand excluded by PLIP IOD.4: 4 residues within 4Å: Chain A: M.68, E.71, E.75 Chain E: E.212 Ligand excluded by PLIP IOD.5: 5 residues within 4Å: Chain B: P.34, K.170, R.173 Chain C: G.61, Q.63 Ligand excluded by PLIP IOD.6: 5 residues within 4Å: Chain C: S.33, E.35, K.170, R.173 Chain D: Q.63 Ligand excluded by PLIP IOD.7: 1 residues within 4Å: Chain D: L.151 Ligand excluded by PLIP IOD.8: 7 residues within 4Å: Chain D: S.33, P.34, E.35, K.170, R.173 Chain E: G.61, Q.63 Ligand excluded by PLIP IOD.9: 5 residues within 4Å: Chain A: G.61 Chain E: P.34, E.35, K.170, R.173 Ligand excluded by PLIP IOD.10: 3 residues within 4Å: Chain E: P.157, K.158, E.159 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Pornillos, O. et al., Atomic-level modelling of the HIV capsid. Nature (2011)

Release Date

2011-01-12

Peptides

HIV-1 CA: ABCDE

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

E
E

HIV-1 CA

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