SMTL ID : 3p0j.1 (3 other biounits)

Leishmania major Tyrosyl-tRNA synthetase in complex with tyrosinol, triclinic crystal form 1

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.89 Å

Oligo State

monomer

Ligands

1 x TYE: 4-[(2S)-2-amino-3-hydroxypropyl]phenol(Non-covalent)

TYE.1: 10 residues within 4Å: Chain A: Y.44, G.46, F.47, E.48, W.78, A.80, Q.175, D.178, L.189, Q.193 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:Y.44, A:A.80, A:L.189 Hydrogen bonds: A:E.48, A:Q.175, A:Q.175, A:D.178, A:D.178

1 x NA: SODIUM ION(Non-functional Binders)

NA.2: 2 residues within 4Å: Chain A: M.115, V.118 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:M.115, A:V.118

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Larson, E.T. et al., The Double-Length Tyrosyl-tRNA Synthetase from the Eukaryote Leishmania major Forms an Intrinsically Asymmetric Pseudo-Dimer. J.Mol.Biol. (2011)

Release Date

2011-03-23

Peptides

Tyrosyl-tRNA synthetase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Tyrosyl-tRNA synthetase

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