SMTL ID : 3p0t.1

Crystal structure of an HIT-like protein from mycobacterium paratuberculosis

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

homo-dimer

Ligands

4 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 8 residues within 4Å: Chain A: A.89, G.90, L.91, E.92, V.93, H.97, H.99 Chain B: L.106 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:A.89, A:G.90, A:L.91, A:E.92, A:V.93 Salt bridges: A:H.97, A:H.99 SO4.2: 1 residues within 4Å: Chain A: R.15 4 PLIP interactions: 4 interactions with chain A Water bridges: A:R.15, A:F.21, A:Q.127 Salt bridges: A:R.15 SO4.3: 4 residues within 4Å: Chain A: R.20, P.118, P.120, L.123 1 PLIP interactions: 1 interactions with chain A Salt bridges: A:R.20 SO4.7: 8 residues within 4Å: Chain A: L.106 Chain B: A.89, G.90, L.91, E.92, V.93, H.97, H.99 8 PLIP interactions: 8 interactions with chain B Hydrogen bonds: B:A.89, B:G.90, B:L.91, B:E.92, B:E.92, B:V.93 Salt bridges: B:H.97, B:H.99

8 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.4: 5 residues within 4Å: Chain A: M.5, F.9, T.33, I.34, L.43 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:I.34 Water bridges: A:T.33 EDO.5: 7 residues within 4Å: Chain A: I.12, G.19, R.20, F.31, L.32, I.34, L.123 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:R.20, A:R.20, A:R.20 EDO.6: 2 residues within 4Å: Chain A: S.105, L.106 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:L.106, A:S.107 EDO.8: 7 residues within 4Å: Chain B: M.5, I.8, F.9, I.12, T.33, I.34, L.43 5 PLIP interactions: 5 interactions with chain B Hydrogen bonds: B:M.5, B:F.9, B:T.33, B:T.33, B:I.34 EDO.9: 6 residues within 4Å: Chain B: I.12, G.19, R.20, F.31, L.32, I.34 4 PLIP interactions: 4 interactions with chain B Hydrogen bonds: B:R.20, B:R.20, B:R.20, B:L.32 EDO.10: 5 residues within 4Å: Chain B: I.8, I.12, L.17, P.18, I.34 1 PLIP interactions: 1 interactions with chain B Water bridges: B:R.20 EDO.11: 3 residues within 4Å: Chain B: R.20, P.120, L.123 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:R.20, B:R.20 EDO.12: 3 residues within 4Å: Chain B: S.105, L.106, S.107 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:L.106, B:S.107

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Baugh, L. et al., Increasing the structural coverage of tuberculosis drug targets. Tuberculosis (Edinb) (2015)

Release Date

2010-12-08

Peptides

Uncharacterized protein: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Uncharacterized protein