SMTL ID : 3p0w.1 (1 other biounit)

Crystal structure of D-Glucarate dehydratase from Ralstonia solanacearum complexed with Mg and D-glucarate

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.71 Å

Oligo State

homo-dimer

Ligands

2 x MG: MAGNESIUM ION(Non-covalent)

MG.1: 5 residues within 4Å: Chain A: D.251, E.276, D.277, N.305 Ligands: GKR.2 3 PLIP interactions: 2 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.251, A:E.276, H2O.2 MG.3: 5 residues within 4Å: Chain B: K.221, D.251, E.276, N.305 Ligands: GKR.4 3 PLIP interactions: 2 interactions with chain B, 1 Ligand-Water interactions Metal complexes: B:D.251, B:E.276, H2O.6

2 x GKR: D-GLUCARATE(Non-covalent)

GKR.2: 15 residues within 4Å: Chain A: N.27, H.32, Y.166, F.168, K.221, K.223, D.251, N.253, E.276, N.305, S.356, N.357, H.384, R.438 Ligands: MG.1 12 PLIP interactions: 12 interactions with chain A Hydrogen bonds: A:N.27, A:N.27, A:N.253, A:N.305, A:S.356, A:R.438, A:R.438 Salt bridges: A:H.32, A:K.221, A:K.223, A:H.384, A:R.438 GKR.4: 16 residues within 4Å: Chain B: N.27, H.32, Y.166, F.168, K.221, K.223, D.251, N.253, E.276, N.305, H.355, S.356, N.357, H.384, R.438 Ligands: MG.3 19 PLIP interactions: 19 interactions with chain B Hydrogen bonds: B:N.27, B:Y.166, B:K.223, B:N.253, B:N.305, B:S.356, B:R.438, B:R.438 Water bridges: B:K.221, B:K.221, B:N.357, B:H.384 Salt bridges: B:H.32, B:K.221, B:K.223, B:K.223, B:H.355, B:H.384, B:R.438

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Fedorov, A.A. et al., Crystal structure of D-Glucarate dehydratase from Ralstonia solanacearum complexed with Mg and D-glucarate. To be Published

Release Date

2010-10-13

Peptides

Mandelate racemase/muconate lactonizing protein: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Mandelate racemase/muconate lactonizing protein

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