SMTL ID : 3p2h.1

Crystal structure of TofI in a ternary complex with an inhibitor and MTA

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

monomer

Ligands

1 x MTA: 5'-DEOXY-5'-METHYLTHIOADENOSINE(Non-covalent)

MTA.1: 8 residues within 4Å: Chain A: W.33, D.45, Q.46, Y.47, L.78, V.82, F.83, R.102 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:W.33, A:D.45, A:Q.46, A:R.102, A:R.102, A:R.170 Water bridges: A:Q.46, A:Q.46

1 x NOO: N-(3-oxocyclohex-1-en-1-yl)octanamide(Non-covalent)

NOO.2: 17 residues within 4Å: Chain A: F.27, L.31, L.100, S.101, R.102, F.103, A.104, L.139, I.140, G.141, V.142, T.143, F.144, M.147, F.151, C.175, I.177 12 PLIP interactions: 12 interactions with chain A Hydrophobic interactions: A:F.27, A:L.31, A:L.100, A:L.100, A:F.103, A:A.104, A:T.143, A:F.144, A:F.151, A:I.177 Hydrogen bonds: A:F.103 Water bridges: A:R.102

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Chung, J. et al., Small-molecule inhibitor binding to an N-acyl-homoserine lactone synthase. Proc.Natl.Acad.Sci.USA (2011)

Release Date

2011-07-06

Peptides

AHL synthase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

AHL synthase

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