SMTL ID : 3p8o.2 (1 other biounit)

Crystal structure of HCV NS3/NS4A protease complexed with des-bromine analogue of BI 201335

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

hetero-oligomer

Ligands

1 x NA: SODIUM ION(Non-functional Binders)

NA.1: 2 residues within 4Å: Chain A: A.5, A.111 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:A.111 Water bridges: A:A.5

1 x L5T: N-[(cyclopentyloxy)carbonyl]-3-methyl-L-valyl-(4R)-N-[(1R,2S)-1-carboxy-2-ethenylcyclopropyl]-4-[(7-methoxy-2-{2-[(2-methylpropanoyl)amino]-1,3-thiazol-4-yl}quinolin-4-yl)oxy]-L-prolinamide(Non-covalent)

L5T.2: 19 residues within 4Å: Chain A: Y.56, H.57, V.78, D.79, D.81, R.123, V.132, L.135, K.136, G.137, S.138, S.139, F.154, R.155, A.156, A.157, V.158, C.159, D.168 18 PLIP interactions: 18 interactions with chain A Hydrophobic interactions: A:V.132, A:L.135, A:K.136, A:F.154, A:F.154, A:V.158, A:D.168 Hydrogen bonds: A:L.135, A:K.136, A:G.137, A:S.138, A:S.139, A:S.139, A:R.155, A:A.157, A:A.157 Salt bridges: A:H.57, A:K.136

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lemke, C.T. et al., Combined X-ray, NMR, and kinetic analyses reveal uncommon binding characteristics of the hepatitis C virus NS3-NS4A protease inhibitor BI 201335. J.Biol.Chem. (2011)

Release Date

2011-01-26

Peptides

HCV serine protease NS3: A
HCV non-structural protein 4A: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
D

HCV serine protease NS3

HCV non-structural protein 4A

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