SMTL ID : 3pay.1

Crystal structure of a putative adhesin (BACOVA_04077) from Bacteroides ovatus at 2.50 A resolution

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

homo-tetramer

Ligands

3 x PEG: DI(HYDROXYETHYL)ETHER(Non-functional Binders)

PEG.1: 5 residues within 4Å: Chain A: T.267, E.268 Chain C: N.227, R.228, Q.272 5 PLIP interactions: 2 interactions with chain C, 3 interactions with chain A Hydrogen bonds: C:N.227, C:R.228, A:E.268 Water bridges: A:E.268, A:E.268 PEG.2: 5 residues within 4Å: Chain C: D.22, Y.23, Y.27, N.150, R.277 3 PLIP interactions: 3 interactions with chain C Hydrogen bonds: C:N.150, C:R.277 Water bridges: C:N.150 PEG.3: 4 residues within 4Å: Chain C: Y.165 Chain D: E.26, Y.27, Y.264 1 PLIP interactions: 1 interactions with chain D Water bridges: D:D.265

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Xu, Q. et al., A Distinct Type of Pilus from the Human Microbiome. Cell (2016)

Release Date

2010-11-10

Peptides

putative adhesin: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

putative adhesin