SMTL ID : 3pd0.2 (1 other biounit)

Caspase-3 E246A

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

homo-tetramer

Ligands

4 x ACE- ASP- GLU- VAL- ASP- 0QE: INHIBITOR AC-DEVD-CMK(Non-covalent)

ACE-ASP-GLU-VAL-ASP-0QE.1: 18 residues within 4Å: Chain A: R.36, S.92, H.93, G.94, Q.133, C.135, Y.176, S.177, W.178, R.179, N.180, S.181, W.186, E.220, S.221, F.222 Chain B: S.30 Ligands: CL.2 Protein-ligand interaction information (PLIP) not available ACE-ASP-GLU-VAL-ASP-0QE.3: 18 residues within 4Å: Chain A: S.30 Chain B: R.36, S.92, H.93, G.94, Q.133, C.135, Y.176, S.177, W.178, R.179, N.180, S.181, W.186, E.220, S.221, F.222 Ligands: CL.4 Protein-ligand interaction information (PLIP) not available ACE-ASP-GLU-VAL-ASP-0QE.5: 18 residues within 4Å: Chain C: R.36, S.92, H.93, G.94, Q.133, C.135, Y.176, S.177, W.178, R.179, N.180, S.181, W.186, E.220, S.221, F.222 Chain D: S.30 Ligands: CL.6 Protein-ligand interaction information (PLIP) not available ACE-ASP-GLU-VAL-ASP-0QE.7: 18 residues within 4Å: Chain C: S.30 Chain D: R.36, S.92, H.93, G.94, Q.133, C.135, Y.176, S.177, W.178, R.179, N.180, S.181, W.186, E.220, S.221, F.222 Ligands: CL.8 Protein-ligand interaction information (PLIP) not available

4 x CL: CHLORIDE ION(Non-functional Binders)

CL.2: 4 residues within 4Å: Chain A: C.135, Y.176 Ligands: ACE-ASP-GLU-VAL-ASP-0QE.1, ACE-ASP-GLU-VAL-ASP-0QE.1 Ligand excluded by PLIP CL.4: 4 residues within 4Å: Chain B: C.135, Y.176 Ligands: ACE-ASP-GLU-VAL-ASP-0QE.3, ACE-ASP-GLU-VAL-ASP-0QE.3 Ligand excluded by PLIP CL.6: 4 residues within 4Å: Chain C: C.135, Y.176 Ligands: ACE-ASP-GLU-VAL-ASP-0QE.5, ACE-ASP-GLU-VAL-ASP-0QE.5 Ligand excluded by PLIP CL.8: 4 residues within 4Å: Chain D: C.135, Y.176 Ligands: ACE-ASP-GLU-VAL-ASP-0QE.7, ACE-ASP-GLU-VAL-ASP-0QE.7 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Walters, J. et al., Thermodynamic, enzymatic and structural effects of removing a salt bridge at the base of loop 4 in (pro)caspase-3. Arch.Biochem.Biophys. (2011)

Release Date

2011-02-16

Peptides

Caspase-3: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

C
A

D
A

Caspase-3

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