SMTL ID : 3pdv.1

Structure of the PDlim2 PDZ domain in complex with the C-terminal 6-peptide extension of NS1

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.20 Å

Oligo State

monomer

Ligands

1 x NA: SODIUM ION(Non-functional Binders)

NA.1: 6 residues within 4Å: Chain A: A.11, W.13, I.69, R.70, Q.71, S.72 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:A.11, A:R.70

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Yu, J. et al., PDlim2 selectively interacts with the PDZ binding motif of highly pathogenic avian H5N1 influenza A virus NS1. Plos One (2011)

Release Date

2011-09-07

Peptides

PDZ and LIM domain protein 2, C-teminal peptide from Nonstructural protein 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

PDZ and LIM domain protein 2, C-teminal peptide from Nonstructural protein 1