SMTL ID : 3pe8.1

Crystal structure of Enoyl-CoA hydratase from Mycobacterium smegmatis

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.60 Å

Oligo State

homo-hexamer

Ligands

6 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.1: 8 residues within 4Å: Chain A: Q.146, K.147, V.148, G.149, A.171 Chain B: G.149 Ligands: EDO.3, EDO.5 5 PLIP interactions: 3 interactions with chain A, 2 interactions with chain B Water bridges: A:P.145, A:G.149, A:G.172, B:V.148, B:V.150 EDO.3: 8 residues within 4Å: Chain B: Q.146, K.147, V.148, G.149, A.171 Chain C: G.149 Ligands: EDO.1, EDO.5 5 PLIP interactions: 3 interactions with chain B, 2 interactions with chain C Water bridges: B:P.145, B:G.149, B:G.172, C:V.148, C:V.150 EDO.5: 8 residues within 4Å: Chain A: G.149 Chain C: Q.146, K.147, V.148, G.149, A.171 Ligands: EDO.1, EDO.3 5 PLIP interactions: 3 interactions with chain C, 2 interactions with chain A Water bridges: C:P.145, C:G.149, C:G.172, A:V.148, A:V.150 EDO.7: 8 residues within 4Å: Chain D: Q.146, K.147, V.148, G.149, A.171 Chain E: G.149 Ligands: EDO.9, EDO.11 5 PLIP interactions: 2 interactions with chain E, 3 interactions with chain D Water bridges: E:V.148, E:V.150, D:P.145, D:G.149, D:G.172 EDO.9: 8 residues within 4Å: Chain E: Q.146, K.147, V.148, G.149, A.171 Chain F: G.149 Ligands: EDO.7, EDO.11 5 PLIP interactions: 3 interactions with chain E, 2 interactions with chain F Water bridges: E:P.145, E:G.149, E:G.172, F:V.148, F:V.150 EDO.11: 8 residues within 4Å: Chain D: G.149 Chain F: Q.146, K.147, V.148, G.149, A.171 Ligands: EDO.7, EDO.9 5 PLIP interactions: 3 interactions with chain F, 2 interactions with chain D Water bridges: F:P.145, F:G.149, F:G.172, D:V.148, D:V.150

6 x ZN: ZINC ION(Non-covalent)

ZN.2: 2 residues within 4Å: Chain A: E.109, H.129 4 PLIP interactions: 2 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:E.109, A:H.129, H2O.3, H2O.3 ZN.4: 2 residues within 4Å: Chain B: E.109, H.129 4 PLIP interactions: 2 interactions with chain B, 2 Ligand-Water interactions Metal complexes: B:E.109, B:H.129, H2O.15, H2O.15 ZN.6: 2 residues within 4Å: Chain C: E.109, H.129 4 PLIP interactions: 2 interactions with chain C, 2 Ligand-Water interactions Metal complexes: C:E.109, C:H.129, H2O.26, H2O.26 ZN.8: 2 residues within 4Å: Chain D: E.109, H.129 4 PLIP interactions: 2 interactions with chain D, 2 Ligand-Water interactions Metal complexes: D:E.109, D:H.129, H2O.37, H2O.37 ZN.10: 2 residues within 4Å: Chain E: E.109, H.129 4 PLIP interactions: 2 interactions with chain E, 2 Ligand-Water interactions Metal complexes: E:E.109, E:H.129, H2O.49, H2O.49 ZN.12: 2 residues within 4Å: Chain F: E.109, H.129 4 PLIP interactions: 2 interactions with chain F, 2 Ligand-Water interactions Metal complexes: F:E.109, F:H.129, H2O.60, H2O.60

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Baugh, L. et al., Increasing the structural coverage of tuberculosis drug targets. Tuberculosis (Edinb) (2015)

Release Date

2010-12-08

Peptides

Enoyl-CoA hydratase: ABCDEF

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

C
A

D
A

E
A

F
A

Enoyl-CoA hydratase