SMTL ID : 3ped.3 (2 other biounits)

Siderocalin Recognitin of Carboxymycobactins: Interference by the immune system in intracellular iron acquisition by Mycobacteria tuberculosis

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

monomer

Ligands

1 x FE: FE (III) ION(Non-covalent)

FE.1: 2 residues within 4Å: Chain A: K.134 Ligands: ZYF.2 No protein-ligand interaction detected (PLIP)

1 x ZYF: (9Z)-11-{hydroxy[(5S)-6-{[(1S)-3-{[(3S)-1-hydroxy-2-oxoazepan-3-yl]amino}-1-methyl-3-oxopropyl]oxy}-5-({[(4S)-2-(2-hydroxyphenyl)-4,5-dihydro-1,3-oxazol-4-yl]carbonyl}amino)-6-oxohexyl]amino}-11-oxoundec-9-enoic acid(Non-covalent)

ZYF.2: 18 residues within 4Å: Chain A: V.33, I.41, Y.52, T.54, V.66, S.68, L.70, W.79, R.81, F.83, F.123, K.125, Y.132, F.133, K.134, T.136, Y.138 Ligands: FE.1 21 PLIP interactions: 21 interactions with chain A Hydrophobic interactions: A:T.54, A:V.66, A:L.70, A:L.70, A:W.79, A:W.79, A:W.79, A:R.81, A:F.83, A:F.123, A:F.123, A:K.125, A:K.125, A:Y.132, A:K.134 Hydrogen bonds: A:K.125, A:K.134, A:Y.138, A:Y.138 Salt bridges: A:K.134 pi-Cation interactions: A:K.125

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.3: 2 residues within 4Å: Chain A: N.114, H.118 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.114

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Hoette, T.M. et al., Siderocalin Recognitin of Carboxymycobactins: Interference by the immune system in intracellular iron acquisition by Mycobacteria tuberculosis. To be Published

Release Date

2011-10-05

Peptides

Neutrophil gelatinase-associated lipocalin: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

Neutrophil gelatinase-associated lipocalin

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