SMTL ID : 3pg7.2 (1 other biounit)

Crystal structure of the H. sapiens NF1 SEC-PH domain (del1750 mutant)

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.19 Å

Oligo State

monomer

Ligands

1 x PTY: PHOSPHATIDYLETHANOLAMINE(Non-covalent)

PTY.1: 17 residues within 4Å: Chain A: Y.28, I.61, F.74, L.79, W.82, F.83, Y.91, V.94, V.97, I.99, W.105, V.106, Y.109, T.110, G.119, L.120, R.125 17 PLIP interactions: 17 interactions with chain A Hydrophobic interactions: A:Y.28, A:Y.28, A:Y.28, A:L.79, A:W.82, A:V.97, A:I.99, A:W.105, A:V.106, A:Y.109, A:T.110, A:L.120 Hydrogen bonds: A:F.83, A:R.125 Water bridges: A:G.119, A:R.125, A:R.125

2 x POP: PYROPHOSPHATE 2-(Non-covalent)

POP.2: 3 residues within 4Å: Chain A: R.107, K.111, R.189 7 PLIP interactions: 7 interactions with chain A Water bridges: A:R.107, A:R.107, A:R.189 Salt bridges: A:R.107, A:K.111, A:K.111, A:R.189 POP.3: 4 residues within 4Å: Chain A: R.73, K.75, T.76, Y.112 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:T.76, A:Y.112 Water bridges: A:T.76, A:T.76 Salt bridges: A:R.73, A:K.75

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Welti, S. et al., Structural and biochemical consequences of NF1 associated nontruncating mutations in the Sec14-PH module of neurofibromin. Hum.Mutat. (2011)

Release Date

2010-12-08

Peptides

Neurofibromin: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Neurofibromin

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