SMTL ID : 3pgk.1

The structure of yeast phosphoglycerate kinase at 0.25 nm resolution

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

monomer

Ligands

1 x MG: MAGNESIUM ION(Non-covalent)

MG.1: 2 residues within 4Å: Chain A: D.373 Ligands: ATP.2 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:D.373

1 x ATP: ADENOSINE-5'-TRIPHOSPHATE(Covalent)

ATP.2: 16 residues within 4Å: Chain A: G.212, A.213, K.214, K.218, F.290, L.312, D.313, N.335, G.336, P.337, G.339, V.340, E.342, D.373 Ligands: MG.1, 3PG.3 11 PLIP interactions: 11 interactions with chain A Hydrogen bonds: A:A.213, A:K.214, A:K.214, A:V.340, A:D.373, A:D.373 Salt bridges: A:K.214, A:K.214, A:K.214, A:K.218, A:K.218

1 x 3PG: 3-PHOSPHOGLYCERIC ACID(Non-covalent)

3PG.3: 5 residues within 4Å: Chain A: G.371, G.393, G.394, G.395 Ligands: ATP.2 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:G.371, A:G.394, A:G.395

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Watson, H.C. et al., Sequence and structure of yeast phosphoglycerate kinase. Embo J. (1982)

Release Date

1982-09-24

Peptides

PHOSPHOGLYCERATE KINASE: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

PHOSPHOGLYCERATE KINASE