SMTL ID : 3pgm.1

THE STRUCTURE OF YEAST PHOSPHOGLYCERATE MUTASE AT 0.28 NM RESOLUTION

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.80 Å

Oligo State

homo-tetramer

Ligands

8 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 7 residues within 4Å: Chain A: H.8, R.59, A.60, N.85, E.86, H.179 Ligands: 3PG.3 1 PLIP interactions: 1 interactions with chain A Salt bridges: A:H.179 SO4.2: 8 residues within 4Å: Chain A: H.8, Q.10, S.11, N.14, E.15, T.20, H.179 Ligands: 3PG.3 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:S.11, A:T.20 Salt bridges: A:H.8 SO4.4: 7 residues within 4Å: Chain B: H.8, R.59, A.60, N.85, E.86, H.179 Ligands: 3PG.6 1 PLIP interactions: 1 interactions with chain B Salt bridges: B:H.179 SO4.5: 8 residues within 4Å: Chain B: H.8, Q.10, S.11, N.14, E.15, T.20, H.179 Ligands: 3PG.6 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:S.11, B:T.20 Salt bridges: B:H.8 SO4.7: 7 residues within 4Å: Chain C: H.8, R.59, A.60, N.85, E.86, H.179 Ligands: 3PG.9 1 PLIP interactions: 1 interactions with chain C Salt bridges: C:H.179 SO4.8: 8 residues within 4Å: Chain C: H.8, Q.10, S.11, N.14, E.15, T.20, H.179 Ligands: 3PG.9 4 PLIP interactions: 4 interactions with chain C Hydrogen bonds: C:S.11, C:T.20, C:T.20 Salt bridges: C:H.8 SO4.10: 7 residues within 4Å: Chain D: H.8, R.59, A.60, N.85, E.86, H.179 Ligands: 3PG.12 1 PLIP interactions: 1 interactions with chain D Salt bridges: D:H.179 SO4.11: 8 residues within 4Å: Chain D: H.8, Q.10, S.11, N.14, E.15, T.20, H.179 Ligands: 3PG.12 4 PLIP interactions: 4 interactions with chain D Hydrogen bonds: D:S.11, D:T.20, D:T.20 Salt bridges: D:H.8

4 x 3PG: 3-PHOSPHOGLYCERIC ACID(Covalent)

3PG.3: 8 residues within 4Å: Chain A: H.8, S.11, E.15, T.20, E.86, H.179 Ligands: SO4.1, SO4.2 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:S.11, A:T.20, A:E.86 Salt bridges: A:H.8, A:H.8, A:H.179, A:H.179 3PG.6: 8 residues within 4Å: Chain B: H.8, S.11, E.15, T.20, E.86, H.179 Ligands: SO4.4, SO4.5 7 PLIP interactions: 7 interactions with chain B Hydrogen bonds: B:S.11, B:T.20, B:E.86 Salt bridges: B:H.8, B:H.8, B:H.179, B:H.179 3PG.9: 8 residues within 4Å: Chain C: H.8, S.11, E.15, T.20, E.86, H.179 Ligands: SO4.7, SO4.8 9 PLIP interactions: 9 interactions with chain C Hydrogen bonds: C:S.11, C:T.20, C:T.20, C:E.86, C:E.86 Salt bridges: C:H.8, C:H.8, C:H.179, C:H.179 3PG.12: 8 residues within 4Å: Chain D: H.8, S.11, E.15, T.20, E.86, H.179 Ligands: SO4.10, SO4.11 9 PLIP interactions: 9 interactions with chain D Hydrogen bonds: D:S.11, D:T.20, D:T.20, D:E.86, D:E.86 Salt bridges: D:H.8, D:H.8, D:H.179, D:H.179

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Winn, S.I. et al., Structure and activity of phosphoglycerate mutase. Philos.Trans.R.Soc.London,Ser.B (1981)

Release Date

1982-05-26

Peptides

Phosphoglycerate mutase 1: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
A

D
B

Phosphoglycerate mutase 1