SMTL ID : 3pgy.2 (1 other biounit)

Serine hydroxymethyltransferase from Staphylococcus aureus, S95P mutant.

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.92 Å

Oligo State

homo-dimer

Ligands

4 x CIT: CITRIC ACID(Non-functional Binders)

CIT.1: 7 residues within 4Å: Chain A: I.78, K.82, E.88, H.89, V.90, E.243, K.246 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:I.78 Hydrogen bonds: A:V.90, A:E.243 Water bridges: A:K.82 Salt bridges: A:K.82, A:K.82, A:H.89, A:H.89, A:K.246, A:K.246, A:K.246 CIT.4: 10 residues within 4Å: Chain A: G.97, P.98, T.226, H.228, K.229, R.235 Chain B: Y.54, E.56, G.259, G.260 17 PLIP interactions: 13 interactions with chain A, 4 interactions with chain B Hydrophobic interactions: A:P.98, B:Y.54 Hydrogen bonds: A:E.35, A:G.97, A:K.229, B:E.56, B:G.259, B:G.260 Water bridges: A:S.96, A:N.101, A:R.235, A:R.235 Salt bridges: A:H.228, A:H.228, A:K.229, A:K.229, A:R.235 CIT.5: 6 residues within 4Å: Chain B: I.78, K.82, E.88, H.89, V.90, K.246 10 PLIP interactions: 10 interactions with chain B Hydrophobic interactions: B:I.78 Hydrogen bonds: B:H.89, B:V.90 Water bridges: B:D.250 Salt bridges: B:K.82, B:K.82, B:H.89, B:H.89, B:K.246, B:K.246 CIT.6: 11 residues within 4Å: Chain A: Y.54, E.56, G.259, G.260 Chain B: E.35, G.97, P.98, T.226, H.228, K.229, R.235 11 PLIP interactions: 9 interactions with chain B, 2 interactions with chain A Hydrogen bonds: B:G.97, B:K.229, B:K.229, A:G.259, A:G.260 Water bridges: B:S.96, B:S.96 Salt bridges: B:H.228, B:H.228, B:K.229, B:R.235

2 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.2: 7 residues within 4Å: Chain A: A.33, S.34, E.35, H.203, K.229 Chain B: Y.54, Y.64 6 PLIP interactions: 5 interactions with chain A, 1 interactions with chain B Hydrogen bonds: A:S.34, A:E.35, A:E.35, A:E.35, A:H.203, B:Y.54 EDO.3: 4 residues within 4Å: Chain A: E.302, S.385, L.386, K.389 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:E.302, A:S.385 Water bridges: A:K.382, A:L.386

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Osipiuk, J. et al., Serine hydroxymethyltransferase from Staphylococcus aureus, S95P mutant. To be Published

Release Date

2010-11-17

Peptides

Serine hydroxymethyltransferase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

B
D

Serine hydroxymethyltransferase

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