SMTL ID : 3phi.2 (1 other biounit)

Shikimate 5-Dehydrogenase (aroE) from Helicobacter pylori in complex with Shikimate and NADPH

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.04 Å

Oligo State

monomer

Ligands

1 x SKM: (3R,4S,5R)-3,4,5-TRIHYDROXYCYCLOHEX-1-ENE-1-CARBOXYLIC ACID(Non-covalent)

SKM.1: 12 residues within 4Å: Chain A: V.8, S.16, S.18, N.63, V.64, T.65, K.69, N.90, D.105, Y.210, Q.237 Ligands: NDP.2 9 PLIP interactions: 9 interactions with chain A Hydrogen bonds: A:S.18, A:S.18, A:T.65, A:K.69, A:K.69, A:N.90, A:N.90, A:Y.210, A:Q.237

1 x NDP: NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE(Non-covalent)

NDP.2: 26 residues within 4Å: Chain A: T.65, L.66, P.67, K.69, D.105, G.125, A.126, G.127, G.128, S.129, N.148, R.149, S.150, A.179, T.180, S.181, A.182, L.184, E.187, P.189, L.208, Y.210, G.230, M.233, L.234 Ligands: SKM.1 21 PLIP interactions: 21 interactions with chain A Hydrogen bonds: A:T.65, A:A.126, A:G.127, A:G.127, A:G.128, A:S.129, A:S.129, A:R.149, A:T.180, A:S.181, A:E.187, A:G.230, A:L.234 Water bridges: A:L.66, A:L.66, A:A.130, A:S.181 Salt bridges: A:K.69, A:R.149 pi-Cation interactions: A:R.149, A:R.149

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Cheng, W.C. et al., Shikimate 5-Dehydrogenase (aroE) from Helicobacter pylori in complex with Shikimate and NADPH. To be Published

Release Date

2011-11-09

Peptides

Shikimate dehydrogenase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Shikimate dehydrogenase

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